RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SSTR3P32745 418 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 JAK3P52333 1124 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 PPFIA1Q13136 1202 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 CUL4AQ13619 759 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 FAM117BQ6P1L5 589 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 PDXDC2PQ6P474 469 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 ADHFE1Q8IWW8 467 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 RDM1Q8NG50 284 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 IFIH1Q9BYX4 1025 aaKnown RBP13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 DISC1Q9NRI5 854 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 TRIOO75962 3097 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 DOCK5Q9H7D0 1870 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 H3BQV1 296 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 HBP1O60381 514 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 NOSTRINQ8IVI9 506 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 CKAP2LQ8IYA6 745 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 FIBCD1Q8N539 461 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 P2RX5Q93086 422 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 GJA10Q969M2 543 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 UNC45AQ9H3U1 944 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 KCNMB3Q9NPA1 279 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 MAFBQ9Y5Q3 323 aaPredicted RBP13.49□□□□□ -0.25
HLA-DOA-204ENST00000485901 CHMP2AO43633 222 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 INSRRP14616 1297 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 ATP2B1P20020 1258 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 BMPR1AP36894 532 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 ZP2Q05996 745 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 SMAD2Q15796 467 aaKnown RBP13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 GRIK4Q16099 956 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 CCDC60Q8IWA6 550 aaPredicted RBP13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 ATP8B4Q8TF62 1192 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 HAS1Q92839 578 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 SNX21Q969T3 373 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 NRBP2Q9NSY0 501 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
HLA-DOA-204ENST00000485901 FSD2A1L4K1 749 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 MBLAC1A4D2B0 266 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 K7ELQ4 463 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 TRAPPC10P48553 1259 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 IGBP1P78318 339 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 PPP2R5CQ13362 524 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 CALCRLQ16602 461 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 MCTP1Q6DN14 999 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 BBXQ8WY36 941 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 ZNF689Q96CS4 500 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 INTS4Q96HW7 963 aaKnown RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 FAM167AQ96KS9 214 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 PRRX2Q99811 253 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 FTHL17Q9BXU8 183 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
HLA-DOA-204ENST00000485901 C5orf42Q9H799 3197 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 WDFY4Q6ZS81 3184 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 NEMFO60524 1076 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 ATP4AP20648 1035 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 PDCP20941 246 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 MCM7P33993 719 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 ORC2Q13416 577 aaPredicted RBP13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 HERC4Q5GLZ8 1057 aaPredicted RBP13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 MARCH8Q5T0T0 291 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 BMP8AQ7Z5Y6 402 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 MTMR9Q96QG7 549 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 VAV3Q9UKW4 847 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 CEP131Q9UPN4 1083 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 PCDHA2Q9Y5H9 948 aa13.46□□□□□ -0.25
HLA-DOA-204ENST00000485901 ADGRA3Q8IWK6 1321 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 ENPP3O14638 875 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 DKC1O60832 514 aaKnown RBP eCLIP13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 UPP2O95045 317 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 CHRNA1P02708 482 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 LINC00271P0C7V0 271 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 KLRC1P26715 233 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 CTNNB1P35222 781 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 LTBRP36941 435 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 MGAT3Q09327 533 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 EPHA7Q15375 998 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZNF174Q15697 407 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms