RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PCDHA7Q9UN72 937 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 YEATS4O95619 227 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 CHRNA1P02708 482 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
APTX-227ENST00000485479 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
APTX-227ENST00000485479 PLCG1P19174 1290 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 UBA7P41226 1012 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 KRT85P78386 507 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 GPNMBQ14956 572 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 SHC4Q6S5L8 630 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 KIAA0319LQ8IZA0 1049 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 NEK9Q8TD19 979 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 VWCEQ96DN2 955 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 PCDHA2Q9Y5H9 948 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 COL1A2P08123 1366 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
APTX-227ENST00000485479 NBNO60934 754 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 IQCF3P0C7M6 154 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
APTX-227ENST00000485479 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
APTX-227ENST00000485479 EMC2Q15006 297 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 TCTN1Q2MV58 587 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
APTX-227ENST00000485479 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
APTX-227ENST00000485479 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 CDY2AQ9Y6F7 541 aa13.25□□□□□ -0.29
APTX-227ENST00000485479 GHRP10912 638 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 SELPP16109 830 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 BFSP2Q13515 415 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 C9orf50Q5SZB4 431 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 TAF2Q6P1X5 1199 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 TMEM40Q8WWA1 233 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 OSMRQ99650 979 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 CFAP45Q9UL16 551 aa13.24□□□□□ -0.29
APTX-227ENST00000485479 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 RSPH10B2B2RC85 870 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
APTX-227ENST00000485479 PPP6R2O75170 966 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 LYPLA2O95372 231 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 FGFR4P22455 802 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 FPGSQ05932 587 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 C16orf59Q7L2K0 433 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 OTUD6AQ7L8S5 288 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
APTX-227ENST00000485479 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 SEZ6LQ9BYH1 1024 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
APTX-227ENST00000485479 EYSQ5T1H1 3165 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 SMIM35A0A1B0GVV1 85 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
APTX-227ENST00000485479 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
APTX-227ENST00000485479 MRPS6P82932 125 aaKnown RBP13.23□□□□□ -0.29
APTX-227ENST00000485479 MCM6Q14566 821 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 PADI6Q6TGC4 694 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 OTOP2Q7RTS6 562 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 KCNG4Q8TDN1 519 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 STAMQ92783 540 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 AK8Q96MA6 479 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
APTX-227ENST00000485479 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
APTX-227ENST00000485479 MGAT3Q09327 533 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 FAM102BQ5T8I3 360 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 CCDC155Q8N6L0 562 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 MTRQ99707 1265 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
APTX-227ENST00000485479 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
APTX-227ENST00000485479 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 KDM3AQ9Y4C1 1321 aa13.22□□□□□ -0.29
APTX-227ENST00000485479 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 SFI1A8K8P3 1242 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 ASAP3Q8TDY4 903 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 GDF15Q99988 308 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms