RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 LRWD1Q9UFC0 647 aa19.88■□□□□ 0.77
SREBF1-213ENST00000485080 SLC4A7Q9Y6M7 1214 aa19.88■□□□□ 0.77
SREBF1-213ENST00000485080 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-213ENST00000485080 GPR32O75388 356 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 MED24O75448 989 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 CRYBB1P53674 252 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-213ENST00000485080 NPEPPSP55786 919 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 PLA2G4FQ68DD2 849 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 KCTD17Q8N5Z5 321 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 CEP170P1Q96L14 293 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 NACC1Q96RE7 527 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 IFIH1Q9BYX4 1025 aaKnown RBP19.87■□□□□ 0.77
SREBF1-213ENST00000485080 OSBPL7Q9BZF2 842 aa19.87■□□□□ 0.77
SREBF1-213ENST00000485080 DBR1Q9UK59 544 aaKnown RBP19.87■□□□□ 0.77
SREBF1-213ENST00000485080 SIP14410 1827 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 DNM2P50570 870 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 CLCN3P51790 818 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 TCTN1Q2MV58 587 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 LRRC71Q8N4P6 559 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 SLC7A3Q8WY07 619 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 SLC9A7Q96T83 725 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 ADAMTS10Q9H324 1103 aa19.86■□□□□ 0.77
SREBF1-213ENST00000485080 CHD9Q3L8U1 2897 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 ZBTB39O15060 712 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 SLC26A4O43511 780 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 GHRP10912 638 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 RARRES1P49788 294 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 WDR5P61964 334 aaKnown RBP19.85■□□□□ 0.77
SREBF1-213ENST00000485080 TMEM62Q0P6H9 643 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 XKR9Q5GH70 373 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 FAM109BQ6ICB4 259 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-213ENST00000485080 ZNF579Q8NAF0 562 aaKnown RBP19.85■□□□□ 0.77
SREBF1-213ENST00000485080 AK8Q96MA6 479 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 AGO3Q9H9G7 860 aaKnown RBP19.85■□□□□ 0.77
SREBF1-213ENST00000485080 SUGCTQ9HAC7 445 aa19.85■□□□□ 0.77
SREBF1-213ENST00000485080 ZBBXA8MT70 800 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 DGAT1O75907 488 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 VTNP04004 478 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 GPC3P51654 580 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 BECN1Q14457 450 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 PTPAQ15257 358 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 SF3A1Q15459 793 aaKnown RBP19.84■□□□□ 0.77
SREBF1-213ENST00000485080 ODR4Q5SWX8 454 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 SH2D3AQ9BRG2 576 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 FTHL17Q9BXU8 183 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 AKT3Q9Y243 479 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 MICAL3Q7RTP6 2002 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 CDH23Q9H251 3354 aa19.84■□□□□ 0.77
SREBF1-213ENST00000485080 TMEM265A0A087WTH1 108 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 ATP2A2P16615 1042 aaKnown RBP19.83■□□□□ 0.77
SREBF1-213ENST00000485080 CCT6AP40227 531 aaKnown RBP19.83■□□□□ 0.77
SREBF1-213ENST00000485080 KCNJ6P48051 423 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 POLGP54098 1239 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-213ENST00000485080 NLRP11P59045 1033 aaKnown RBP19.83■□□□□ 0.77
SREBF1-213ENST00000485080 DRP2Q13474 957 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 KIZQ2M2Z5 673 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 HYIQ5T013 277 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 KRT79Q5XKE5 535 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 ZNF410Q86VK4 478 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 PIGOQ8TEQ8 1089 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 TCP11Q8WWU5 503 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 LRCH3Q96II8 777 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 MMTAG2Q9BU76 263 aaKnown RBP19.83■□□□□ 0.77
SREBF1-213ENST00000485080 CDHR5Q9HBB8 845 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 SUCLA2Q9P2R7 463 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-213ENST00000485080 PADI3Q9ULW8 664 aa19.83■□□□□ 0.77
SREBF1-213ENST00000485080 LOXHD1Q8IVV2 1947 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 ARID2Q68CP9 1835 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 ASAP2O43150 1006 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 ZSCAN22P10073 491 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-213ENST00000485080 EIF4BP23588 611 aaKnown RBP19.82■□□□□ 0.76
SREBF1-213ENST00000485080 EMC2Q15006 297 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 ECM1Q16610 540 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 POTEGQ6S5H5 508 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 SNX29Q8TEQ0 813 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 TMEM40Q8WWA1 233 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 ERVK-5Q9HDB9 667 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 CLIC4Q9Y696 253 aa19.82■□□□□ 0.76
SREBF1-213ENST00000485080 VWA3AA6NCI4 1184 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 GPR182O15218 404 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 RPS6KA5O75582 802 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 DARSP14868 501 aaKnown RBP19.81■□□□□ 0.76
SREBF1-213ENST00000485080 CD52P31358 61 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 LONP1P36776 959 aaKnown RBP19.81■□□□□ 0.76
SREBF1-213ENST00000485080 NASPP49321 788 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-213ENST00000485080 PAK2Q13177 524 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 RAB30Q15771 203 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 HERC6Q8IVU3 1022 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 PSPC1Q8WXF1 523 aaKnown RBP19.81■□□□□ 0.76
SREBF1-213ENST00000485080 OSMRQ99650 979 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 XPNPEP1Q9NQW7 623 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 NOC2LQ9Y3T9 749 aaKnown RBP19.81■□□□□ 0.76
SREBF1-213ENST00000485080 PCDHA11Q9Y5I1 949 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 CHD7Q9P2D1 2997 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 TTC3P53804 2025 aa19.81■□□□□ 0.76
SREBF1-213ENST00000485080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-213ENST00000485080 PP2D1A8MPX8 630 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 GRXCR1A8MXD5 290 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 AMHP03971 560 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 MXD4Q14582 209 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms