RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ST3GAL5Q9UNP4 418 aa22.39■■□□□ 1.17
HPS4-213ENST00000483631 GINS2Q9Y248 185 aa22.39■■□□□ 1.17
HPS4-213ENST00000483631 FNDC1Q4ZHG4 1894 aaPredicted RBP22.39■■□□□ 1.17
HPS4-213ENST00000483631 PRKCEQ02156 737 aa22.38■■□□□ 1.17
HPS4-213ENST00000483631 PUS10Q3MIT2 529 aaKnown RBP22.38■■□□□ 1.17
HPS4-213ENST00000483631 SLC24A5Q71RS6 500 aa22.38■■□□□ 1.17
HPS4-213ENST00000483631 ETNPPLQ8TBG4 499 aa22.38■■□□□ 1.17
HPS4-213ENST00000483631 CDHR5Q9HBB8 845 aa22.38■■□□□ 1.17
HPS4-213ENST00000483631 LRFN2Q9ULH4 789 aa22.38■■□□□ 1.17
HPS4-213ENST00000483631 TPCN1Q9ULQ1 816 aa22.38■■□□□ 1.17
HPS4-213ENST00000483631 TDP2O95551 362 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 GCFC2P16383 781 aaKnown RBP22.37■■□□□ 1.17
HPS4-213ENST00000483631 KIZQ2M2Z5 673 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 TMEM266Q2M3C6 531 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 PPP4R3AQ6IN85 833 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 EFCAB12Q6NXP0 572 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 MIER3Q7Z3K6 550 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 WASF1Q92558 559 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 PABPC5Q96DU9 382 aaKnown RBP22.37■■□□□ 1.17
HPS4-213ENST00000483631 AIFM3Q96NN9 605 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 OSMRQ99650 979 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 NAP1L4Q99733 375 aaKnown RBP22.37■■□□□ 1.17
HPS4-213ENST00000483631 PCDHB7Q9Y5E2 793 aa22.37■■□□□ 1.17
HPS4-213ENST00000483631 DENND3A2RUS2 1198 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 C9IYK1 514 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 MMP1P03956 469 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 CDC42EP1Q00587 391 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 TARBP2Q15633 366 aaKnown RBP22.36■■□□□ 1.17
HPS4-213ENST00000483631 XKR3Q5GH77 459 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 FAM228AQ86W67 206 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 NEK9Q8TD19 979 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 ADAM2Q99965 735 aa22.36■■□□□ 1.17
HPS4-213ENST00000483631 NIFKQ9BYG3 293 aaKnown RBP22.36■■□□□ 1.17
HPS4-213ENST00000483631 ELAC1Q9H777 363 aaKnown RBP22.36■■□□□ 1.17
HPS4-213ENST00000483631 DDX25Q9UHL0 483 aaKnown RBP22.36■■□□□ 1.17
HPS4-213ENST00000483631 MRPL42Q9Y6G3 142 aaKnown RBP22.36■■□□□ 1.17
HPS4-213ENST00000483631 CCDC194A0A1B0GVG4 234 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 CHMP2AO43633 222 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 MGEA5O60502 916 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 VTNP04004 478 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 CLCN3P51790 818 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 FAM189BP81408 668 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 TBC1D8BQ0IIM8 1120 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 INF2Q27J81 1249 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 TCEAL5Q5H9L2 206 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 FAM20AQ96MK3 541 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 NECAB3Q96P71 396 aaPredicted RBP22.35■■□□□ 1.17
HPS4-213ENST00000483631 ADAMTS10Q9H324 1103 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 AKT3Q9Y243 479 aa22.35■■□□□ 1.17
HPS4-213ENST00000483631 TBX3O15119 743 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 GRM6O15303 877 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 KCNA5P22460 613 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 EIF4BP23588 611 aaKnown RBP22.34■■□□□ 1.17
HPS4-213ENST00000483631 NLRP11P59045 1033 aaKnown RBP22.34■■□□□ 1.17
HPS4-213ENST00000483631 DSC3Q14574 896 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 UGCGQ16739 394 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 TRMT1LQ7Z2T5 733 aaKnown RBP22.34■■□□□ 1.17
HPS4-213ENST00000483631 NEK8Q86SG6 692 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 KCNMB3Q9NPA1 279 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 TMEM161AQ9NX61 479 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 KCNJ14Q9UNX9 436 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 PLAGL2Q9UPG8 496 aa22.34■■□□□ 1.17
HPS4-213ENST00000483631 GPC3P51654 580 aa22.33■■□□□ 1.17
HPS4-213ENST00000483631 AK2P54819 239 aa22.33■■□□□ 1.17
HPS4-213ENST00000483631 PPP2R5CQ13362 524 aa22.33■■□□□ 1.17
HPS4-213ENST00000483631 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.33■■□□□ 1.17
HPS4-213ENST00000483631 IGKV6-21A0A0C4DH24 114 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 HOXA2O43364 376 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 DKC1O60832 514 aaKnown RBP eCLIP22.32■■□□□ 1.16
HPS4-213ENST00000483631 CTDNEP1O95476 244 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 LETM2Q2VYF4 491 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 LRRC71Q8N4P6 559 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 GJA10Q969M2 543 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 PPP2R3CQ969Q6 453 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 CEP89Q96ST8 783 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 AAASQ9NRG9 546 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 ORC3Q9UBD5 711 aaPredicted RBP22.32■■□□□ 1.16
HPS4-213ENST00000483631 FAM50BQ9Y247 325 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 PPME1Q9Y570 386 aa22.32■■□□□ 1.16
HPS4-213ENST00000483631 SLC37A4O43826 429 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 STBD1O95210 358 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 DARSP14868 501 aaKnown RBP22.31■■□□□ 1.16
HPS4-213ENST00000483631 PSMC5P62195 406 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 UBE3AQ05086 875 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 CSPP1Q1MSJ5 1256 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 CTC1Q2NKJ3 1217 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 SPPL3Q8TCT6 385 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 GTF3C6Q969F1 213 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 JPH2Q9BR39 696 aaPredicted RBP22.31■■□□□ 1.16
HPS4-213ENST00000483631 ATP6V0A4Q9HBG4 840 aa22.31■■□□□ 1.16
HPS4-213ENST00000483631 SEPT9Q9UHD8 586 aaPredicted RBP22.31■■□□□ 1.16
HPS4-213ENST00000483631 GRXCR2A6NFK2 248 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 ITGB1P05556 798 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 ZSCAN20P17040 1043 aaPredicted RBP22.3■■□□□ 1.16
HPS4-213ENST00000483631 DNM2P50570 870 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 CAMK1Q14012 370 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 PAN2Q504Q3 1202 aaKnown RBP22.3■■□□□ 1.16
HPS4-213ENST00000483631 PTCRAQ6ISU1 281 aaPredicted RBP22.3■■□□□ 1.16
HPS4-213ENST00000483631 EXOC8Q8IYI6 725 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 PPP1R16BQ96T49 567 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms