RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MAP9Q49MG5 647 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 OLFM4Q6UX06 510 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 TTLL7Q6ZT98 887 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 PPP1R42Q7Z4L9 355 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 SLCO6A1Q86UG4 719 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 FERMT3Q86UX7 667 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 PNMA8AQ86V59 439 aaPredicted RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 SYNE4Q8N205 404 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 RBM17Q96I25 401 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 SRPK1Q96SB4 655 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 THUMPD2Q9BTF0 503 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 TMX4Q9H1E5 349 aaPredicted RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 POLR2AP24928 1970 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 NTSR2O95665 410 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 PRKCAP17252 672 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 EPHX2P34913 555 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 ARL4AP40617 200 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 CTSKP43235 329 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 CRY2Q49AN0 593 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 PARP10Q53GL7 1025 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 TMC6Q7Z403 805 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 TMEM192Q8IY95 271 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 GPC2Q8N158 579 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 SYT8Q8NBV8 401 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 PLEKHF1Q96S99 279 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 CEP89Q96ST8 783 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 MTA3Q9BTC8 594 aa8.06□□□□□ -1.12
CLK1-212ENST00000482590 CCDC189A1A4V9 331 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 FZD9O00144 591 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 MEIS1O00470 390 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 ZNF205O95201 554 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 EIF2S2P20042 333 aaKnown RBP8.05□□□□□ -1.12
CLK1-212ENST00000482590 CCNFP41002 786 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 RIPK4P57078 832 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 LAPTM5Q13571 262 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 RAB3GAP1Q15042 981 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 HSP90AB3PQ58FF7 597 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 SUSD4Q5VX71 490 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 HS2ST1Q7LGA3 356 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 NIM1KQ8IY84 436 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 ZDHHC14Q8IZN3 488 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 ZNF296Q8WUU4 475 aaPredicted RBP8.05□□□□□ -1.12
CLK1-212ENST00000482590 IL17RAQ96F46 866 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 ACSL6Q9UKU0 697 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 PCDHA5Q9Y5H7 936 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 AKAP11Q9UKA4 1901 aa8.05□□□□□ -1.12
CLK1-212ENST00000482590 TCERG1O14776 1098 aaKnown RBP8.04□□□□□ -1.12
CLK1-212ENST00000482590 PPIP5K2O43314 1243 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 BMP8BP34820 402 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 GYS2P54840 703 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 CYP4F8P98187 520 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 CLCQ05315 142 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 PAK2Q13177 524 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 OS9Q13438 667 aaPredicted RBP8.04□□□□□ -1.12
CLK1-212ENST00000482590 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 KIAA0907Q7Z7F0 614 aaPredicted RBP8.04□□□□□ -1.12
CLK1-212ENST00000482590 SP8Q8IXZ3 490 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 ZNF34Q8IZ26 560 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 SUPT20HQ8NEM7 779 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 GPRASP2Q96D09 838 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 CRAMP1Q96RY5 1269 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 APBA2Q99767 749 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 CDADC1Q9BWV3 514 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 ANTXR1Q9H6X2 564 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 TNFRSF12AQ9NP84 129 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 FANCLQ9NW38 375 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 DUOX1Q9NRD9 1551 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 CACNA1FO60840 1977 aa8.04□□□□□ -1.12
CLK1-212ENST00000482590 ABCC4O15439 1325 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 A0A1W2PQ45 241 aaPredicted RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 A0A1W2PQY0 241 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 NUDT19A8MXV4 375 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 ANXA1P04083 346 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 ENDOUP21128 410 aaKnown RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 GNALP38405 381 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 NCKAP1LP55160 1127 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 CBX2Q14781 532 aaPredicted RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 GK5Q6ZS86 529 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 CNTROBQ8N137 903 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 TMEM52Q8NDY8 209 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 NUP43Q8NFH3 380 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 SLC39A13Q96H72 371 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 PWWP2AQ96N64 755 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 UTP14AQ9BVJ6 771 aaKnown RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 MKRN2Q9H000 416 aaKnown RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 LUC7LQ9NQ29 371 aaKnown RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 BABAM1Q9NWV8 329 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 SNTG2Q9NY99 539 aa8.03□□□□□ -1.12
CLK1-212ENST00000482590 ABT1Q9ULW3 272 aaKnown RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 MYBBP1AQ9BQG0 1328 aaKnown RBP8.03□□□□□ -1.12
CLK1-212ENST00000482590 FOXN1O15353 648 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 CELA3BP08861 270 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 VAV1P15498 845 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 NME1P15531 152 aaKnown RBP8.02□□□□□ -1.13
CLK1-212ENST00000482590 TMPOP42166 694 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms