RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 FAM189BP81408 668 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 TROAPQ12815 778 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 TRDNQ13061 729 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 SIX5Q8N196 739 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 C12orf76Q8N812 135 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-224ENST00000481929 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-224ENST00000481929 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 HINFPQ9BQA5 517 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 JADE2Q9NQC1 790 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
HDAC6-224ENST00000481929 ACACBO00763 2458 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 SLC26A2P50443 739 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 ACTR2P61160 394 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 TDGQ13569 410 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 FAM228AQ86W67 206 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 KIAA0319LQ8IZA0 1049 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 SLC39A11Q8N1S5 342 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 DUSP12Q9UNI6 340 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 OTOGLQ3ZCN5 2332 aa17.09■□□□□ 0.33
HDAC6-224ENST00000481929 HIP1O00291 1037 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 ARP10275 920 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 DSC3Q14574 896 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 WTAPQ15007 396 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 KIZQ2M2Z5 673 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 OTOP3Q7RTS5 596 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 CNTNAP3BQ96NU0 1288 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 OSMRQ99650 979 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 SPZ1Q9BXG8 430 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 CNTNAP3Q9BZ76 1288 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 RNF19AQ9NV58 838 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 R4GN57 208 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 DNAH14Q0VDD8 3507 aa17.08■□□□□ 0.32
HDAC6-224ENST00000481929 KMT2BQ9UMN6 2715 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-224ENST00000481929 NFASCO94856 1347 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-224ENST00000481929 SPDYE3A6NKU9 549 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 STK25O00506 426 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 HBP1O60381 514 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 CXCL14O95715 111 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 RFX1P22670 979 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 CRYBB1P53674 252 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-224ENST00000481929 SART3Q15020 963 aaKnown RBP17.07■□□□□ 0.32
HDAC6-224ENST00000481929 KANK3Q6NY19 840 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 ZC3H14Q6PJT7 736 aaKnown RBP17.07■□□□□ 0.32
HDAC6-224ENST00000481929 CCDC149Q6ZUS6 474 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 PPP1R16BQ96T49 567 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 KCNH7Q9NS40 1196 aa17.07■□□□□ 0.32
HDAC6-224ENST00000481929 COL1A2P08123 1366 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 EPCAMP16422 314 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 UBE2SQ16763 222 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 TMC5Q6UXY8 1006 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 CABP7Q86V35 215 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 TMEM169Q96HH4 297 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 LNPKQ9C0E8 428 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 DLL3Q9NYJ7 618 aa17.06■□□□□ 0.32
HDAC6-224ENST00000481929 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 SPTBN2O15020 2390 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 BACH1O14867 736 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-224ENST00000481929 KIF5BP33176 963 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
HDAC6-224ENST00000481929 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
HDAC6-224ENST00000481929 ZNF484Q5JVG2 852 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 FAM160B1Q5W0V3 765 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
HDAC6-224ENST00000481929 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 VPS52Q8N1B4 723 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 CTCFLQ8NI51 663 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-224ENST00000481929 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-224ENST00000481929 RUBCNQ92622 972 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 MXRA8Q9BRK3 442 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 ZBP1Q9H171 429 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 KCNK12Q9HB15 430 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
HDAC6-224ENST00000481929 NT5C1B-RDH14C9J2C7 533 aa17.04■□□□□ 0.32
HDAC6-224ENST00000481929 GIT2Q14161 759 aa17.04■□□□□ 0.32
HDAC6-224ENST00000481929 AUTS2Q8WXX7 1259 aa17.04■□□□□ 0.32
HDAC6-224ENST00000481929 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
HDAC6-224ENST00000481929 SFXN1Q9H9B4 322 aa17.04■□□□□ 0.32
HDAC6-224ENST00000481929 IGSF9Q9P2J2 1179 aa17.04■□□□□ 0.32
HDAC6-224ENST00000481929 EVPLQ92817 2033 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 ATG7O95352 703 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 VTNP04004 478 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 BCAR1P56945 870 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 CLLU1OSQ5K130 101 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 GPR149Q86SP6 731 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 HELQQ8TDG4 1101 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 SLC22A17Q8WUG5 538 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 MAP3K14Q99558 947 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms