RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 IL31RAQ8NI17 732 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 IGDCC4Q8TDY8 1250 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ADAMTS19Q8TE59 1207 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 RSPH1Q8WYR4 309 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ATP6V0A1Q93050 837 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 VWCEQ96DN2 955 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ASB2Q96Q27 587 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 UHRF1Q96T88 793 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 GPR20Q99678 358 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 C16orf70Q9BSU1 422 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ALG1Q9BT22 464 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 LSG1Q9H089 658 aaKnown RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 PSTPIP2Q9H939 334 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 VAT1LQ9HCJ6 419 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 JPH1Q9HDC5 661 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ANO2Q9NQ90 1003 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 PRDM6Q9NQX0 595 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ERAP1Q9NZ08 941 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 TUBE1Q9UJT0 475 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 FAM50BQ9Y247 325 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 SUPT16HQ9Y5B9 1047 aaKnown RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 PCDHB9Q9Y5E1 797 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 SQORQ9Y6N5 450 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 COL1A2P08123 1366 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ADGRA3Q8IWK6 1321 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 C5orf42Q9H799 3197 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 MBLAC1A4D2B0 266 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-208ENST00000481484 CARNS1A5YM72 827 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 RRN3P2A6NIE6 340 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 MEIS2O14770 477 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 SLC27A2O14975 620 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ZBTB43O43298 467 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 NCK2O43639 380 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 NBNO60934 754 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 REC8O95072 547 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ADH1AP07327 375 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 KCNA2P16389 499 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 THPOP40225 353 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 PTGIRP43119 386 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 RABGGTBP53611 331 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 NAPAP54920 295 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 CHMP4BP1P59074 171 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 MRPS9P82933 396 aaKnown RBP4.73□□□□□ -1.65
VPS13D-208ENST00000481484 HTRA4P83105 476 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-208ENST00000481484 TAP1Q03518 808 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 PPFIA1Q13136 1202 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 SEMA3FQ13275 785 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ADGRE1Q14246 886 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 RTN1Q16799 776 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 SLC35G1Q2M3R5 365 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.73□□□□□ -1.65
VPS13D-208ENST00000481484 TSGA10IPQ3SY00 556 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 PLEKHG4Q58EX7 1191 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 FAM26DQ5JW98 314 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ODR4Q5SWX8 454 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 TMEM63BQ5T3F8 832 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ZNF618Q5T7W0 954 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 CREB3L3Q68CJ9 461 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 APOA5Q6Q788 366 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 TSHZ1Q6ZSZ6 1077 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 HEATR3Q7Z4Q2 680 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 FANCBQ8NB91 859 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 BICD2Q8TD16 824 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 LMBR1Q8WVP7 490 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 ZNF592Q92610 1267 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 PPP2R3CQ969Q6 453 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 SDF4Q9BRK5 362 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 C11orf84Q9BUA3 381 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-208ENST00000481484 FTHL17Q9BXU8 183 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 IFIH1Q9BYX4 1025 aaKnown RBP4.73□□□□□ -1.65
VPS13D-208ENST00000481484 LMAN2LQ9H0V9 348 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 SMARCAD1Q9H4L7 1026 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 AZI2Q9H6S1 392 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 MTCH2Q9Y6C9 303 aa4.73□□□□□ -1.65
VPS13D-208ENST00000481484 KDM3AQ9Y4C1 1321 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 LINC01553A4QN01 128 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 GOLGA8AA7E2F4 631 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 GOLGA8BA8MQT2 603 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 C5orf67F2Z3F1 127 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 EIF5BO60841 1220 aaKnown RBP4.72□□□□□ -1.65
VPS13D-208ENST00000481484 PPFIA3O75145 1194 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 PLEKHA8P1O95397 391 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 RB1P06400 928 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 TCF7P36402 384 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-208ENST00000481484 SREBF1P36956 1147 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 GMPRP36959 345 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 CTSOP43234 321 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-208ENST00000481484 RAB15P59190 212 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 ADAM17P78536 824 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 DEFB103AP81534 67 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 ARHGAP4P98171 946 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 FGD1P98174 961 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 INSM1Q01101 510 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-208ENST00000481484 GRB10Q13322 594 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 MBTPS1Q14703 1052 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 NECTIN1Q15223 517 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 GRIK4Q16099 956 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 CEP55Q53EZ4 464 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 NAALADL2Q58DX5 795 aa4.72□□□□□ -1.65
VPS13D-208ENST00000481484 IER5Q5VY09 327 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms