RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 SSH3Q8TE77 659 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 LENG1Q96BZ8 264 aaPredicted RBP4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 RMDN1Q96DB5 314 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 NDE1Q9NXR1 346 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 GTF3C4Q9UKN8 822 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 MAGEB6P1A0A0J9YX57 407 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 MMEP08473 750 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 ZNF24P17028 368 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 CYP7A1P22680 504 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 PDE1AP54750 535 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 AP1B1Q10567 949 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 ZCWPW2Q504Y3 356 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 TMEM63BQ5T3F8 832 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 BEND3Q5T5X7 828 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 MFSD6Q6ZSS7 791 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 NCAPG2Q86XI2 1143 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 ICA1LQ8NDH6 482 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 ZNF473Q8WTR7 871 aaKnown RBP4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 POMGNT1Q8WZA1 660 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 NUDT16L1Q9BRJ7 211 aaKnown RBP4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 RAB34Q9BZG1 259 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 TUBB1Q9H4B7 451 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 CD209Q9NNX6 404 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 CIDEBQ9UHD4 219 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 IPPQ9Y573 584 aa4.87□□□□□ -1.63
GPCPD1-205ENST00000481038 KAT6BQ8WYB5 2073 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 COL15A1P39059 1388 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 PLCD1P51178 756 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 MED21Q13503 144 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CUL1Q13616 776 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CFAP221Q4G0U5 840 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 FCHSD1Q86WN1 690 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CCDC103Q8IW40 242 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 NMD3Q96D46 503 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 MASTLQ96GX5 879 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 SCYL1Q96KG9 808 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 KIFC3Q9BVG8 833 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 RHOBTB2Q9BYZ6 727 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ZCWPW1Q9H0M4 648 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CCDC8Q9H0W5 538 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 PCSK1NQ9UHG2 260 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 DNALI1O14645 258 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 SERPINB2P05120 415 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 STIP1P31948 543 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 GGCXP38435 758 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 MKRN3Q13064 507 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ATP1A4Q13733 1029 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 SCAIQ8N9R8 606 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ATP8B4Q8TF62 1192 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 LRGUKQ96M69 825 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ZNF285Q96NJ3 590 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 TRPV6Q9H1D0 765 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 EPN3Q9H201 632 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 FARSBQ9NSD9 589 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 PLAAQ9Y263 795 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 C15orf41Q9Y2V0 281 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CSPG5O95196 566 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 GSTT1P30711 240 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 IST1P53990 364 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 SLC7A5Q01650 507 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 DNM1Q05193 864 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 TBC1D9Q6ZT07 1266 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ADCK1Q86TW2 530 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 LARGE2Q8N3Y3 721 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ASZ1Q8WWH4 475 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 NDNQ99608 321 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 MRPS26Q9BYN8 205 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 RAB17Q9H0T7 212 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 PPCSQ9HAB8 311 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 BMP2KQ9NSY1 1161 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 EXOC7Q9UPT5 735 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 KLHL20Q9Y2M5 609 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CHD2O14647 1828 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 MYO5BQ9ULV0 1848 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 SLIT3O75094 1523 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 H7C1D1 291 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 RANBP6O60518 1105 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ASS1P00966 412 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ANXA1P04083 346 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 MAP4P27816 1152 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CSE1LP55060 971 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 DEFA1P59665 94 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 DEFA3P59666 94 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 SPAG1Q07617 926 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 VEPH1Q14D04 833 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 TNNI3KQ59H18 835 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 RSBN1Q5VWQ0 802 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 PPP4R3AQ6IN85 833 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 OSCP1Q8WVF1 389 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ARHGEF1Q92888 912 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 PDLIM2Q96JY6 352 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 RILPQ96NA2 401 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ACAP3Q96P50 834 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 DDX56Q9NY93 547 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 KIF17Q9P2E2 1029 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 ASAP1Q9ULH1 1129 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 COL5A2P05997 1499 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-205ENST00000481038 CEMIPQ8WUJ3 1361 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms