RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ERICH1Q86X53 443 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 USP44Q9H0E7 712 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 OLFML3Q9NRN5 406 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 STAP1Q9ULZ2 295 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PCDHA5Q9Y5H7 936 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 SNX5Q9Y5X3 404 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 TPRP12270 2363 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CDK12Q9NYV4 1490 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 SORBS3O60504 671 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 FBXW4P57775 412 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 RARS2Q5T160 578 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PITPNM3Q9BZ71 974 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CCNE1P24864 410 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 TMED1Q13445 227 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 MED21Q13503 144 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 MAPRE2Q15555 327 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 VSTM4Q8IW00 320 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 OPTNQ96CV9 577 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 BTBD6Q96KE9 485 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 NHEJ1Q9H9Q4 299 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PPARGC1AQ9UBK2 798 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 GOLGA8TH3BQL2 631 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 MEIS1O00470 390 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ACSL3O95573 720 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 GOLGA8HP0CJ92 632 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ACBD5Q5T8D3 534 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 FASTKD5Q7L8L6 764 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 TAB3Q8N5C8 712 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 SLITRK6Q9H5Y7 841 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PTH1RQ03431 593 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 AP3B2Q13367 1082 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 NAALADL2Q58DX5 795 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 TRIM54Q9BYV2 358 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 NDEL1Q9GZM8 345 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 GUCY2CP25092 1073 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 TTC19Q6DKK2 380 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 GRAMD4Q6IC98 578 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 OLFM3Q96PB7 478 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 MPP6Q9NZW5 540 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CCDC78A2IDD5 438 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PLEKHG2Q9H7P9 1386 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF18P17022 549 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CAPRIN1Q14444 709 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ANO5Q75V66 913 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ULK4Q96C45 1275 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PPP1R2P1Q96PQ5 205 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CREB3O43889 395 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 PCYT1AP49585 367 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 TAP1Q03518 808 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 IMPG1Q17R60 797 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 KHDRBS2Q5VWX1 349 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 PDXDC2PQ6P474 469 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 LRRC31Q6UY01 552 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 TADA2BQ86TJ2 420 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 NAF1Q96HR8 494 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 PTCH1Q13635 1447 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 HECW2Q9P2P5 1572 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 CFLARO15519 480 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 NUDT18Q6ZVK8 323 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 KLHL8Q9P2G9 620 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 FBXO40Q9UH90 709 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 WDR19Q8NEZ3 1342 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 ABTB1Q969K4 478 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 GFM2Q969S9 779 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 DACH2Q96NX9 599 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 SH2B2O14492 632 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF263O14978 683 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 PRPF3O43395 683 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 TADA3O75528 432 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 GGPS1O95749 300 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 STOML1Q9UBI4 398 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 K7ERI5 159 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 NNMTP40261 264 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF699Q32M78 642 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 TBC1D9BQ66K14 1250 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 FAM196AQ6ZSG2 479 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 C7orf31Q8N865 590 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 CDC26Q8NHZ8 85 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 LSG1Q9H089 658 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 MAN1B1Q9UKM7 699 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 AP3B1O00203 1094 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 ESRRBO95718 433 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 RCAN1P53805 252 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 HSPA2P54652 639 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 EPM2AIP1Q7L775 607 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 LCA5Q86VQ0 697 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 N4BP2L2Q92802 583 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 EAF2Q96CJ1 260 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 DDX56Q9NY93 547 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 NCAPD2Q15021 1401 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 GYG2O15488 501 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 AP2B1P63010 937 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms