RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 TACC1O75410 805 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PLS3P13797 630 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 H2AFXP16104 143 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NAA30Q147X3 362 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RSRC2Q7L4I2 434 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 C12orf56Q8IXR9 622 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SYCP3Q8IZU3 236 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DNERQ8NFT8 737 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ATP6V0A1Q93050 837 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SLC35C1Q96A29 364 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 MOV10L1Q9BXT6 1211 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 C17orf75Q9HAS0 396 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CSADQ9Y600 493 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ZBTB39O15060 712 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 MAPK13O15264 365 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 MAPK7Q13164 816 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TMEM132BQ14DG7 1078 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 HGSNATQ68CP4 663 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 HVCN1Q96D96 273 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ACCSQ96QU6 501 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GANQ9H2C0 597 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PKD2L1Q9P0L9 805 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 V9GYY5 206 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SBF1O95248 1867 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PFASO15067 1338 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ATP8B3O60423 1300 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
TRAF3IP3-213ENST00000478359 K7ENM7 598 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ERCC3P19447 782 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RFX1P22670 979 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 MAGEA1P43355 309 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 AMPD2Q01433 879 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SULF1Q8IWU6 871 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 VTI1AQ96AJ9 217 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 BORCS6Q96GS4 357 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 AGPAT3Q9NRZ7 376 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CYP39A1Q9NYL5 469 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 EXOC7Q9UPT5 735 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SAR1BQ9Y6B6 198 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CTAGE15A4D2H0 777 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CLIC2O15247 247 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PSAPP07602 524 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CTAGE8P0CG41 777 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 UCHL3P15374 230 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SCP2P22307 547 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 IREB2P48200 963 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SMTNP53814 917 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GTF2BQ00403 316 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CKAP4Q07065 602 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CETN1Q12798 172 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ASIC2Q16515 512 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ZC2HC1CQ53FD0 456 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 KLHDC7AQ5VTJ3 777 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 FBXO38Q6PIJ6 1188 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TRAPPC11Q7Z392 1133 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CTAGE6Q86UF2 777 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CTAGE4Q8IX94 777 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DAW1Q8N136 415 aa13.65□□□□□ -0.22
TRAF3IP3-213ENST00000478359 P4HA2O15460 535 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ABL1P00519 1130 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 CCDC172P0C7W6 258 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 KRT13P13646 458 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PRLRP16471 622 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PON1P27169 355 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 CYP27A1Q02318 531 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 KCNA1Q09470 495 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 KLHL30Q0D2K2 578 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 RAPGEF1Q13905 1077 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 SLC18A3Q16572 532 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PRAMEF18Q5VWM3 479 aa13.64□□□□□ -0.23
TRAF3IP3-213ENST00000478359 IQCEQ6IPM2 695 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms