RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 EVPLQ92817 2033 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 TTC26A0AVF1 554 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 MAPK13O15264 365 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 PMM2O15305 246 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 SLC10A3P09131 477 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 SKILP12757 684 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 CLDN10P78369 228 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 ARHGAP1Q07960 439 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 MAN2A1Q16706 1144 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 HERC4Q5GLZ8 1057 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-203ENST00000477626 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
PRPF39-203ENST00000477626 ABLIM1O14639 778 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 CASP14P31944 242 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 DNM2P50570 870 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 CAP1Q01518 475 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 ENPEPQ07075 957 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 TRIM47Q96LD4 638 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 SYT11Q9BT88 431 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 EFCC1Q9HA90 598 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 SCN10AQ9Y5Y9 1956 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 PIGRP01833 764 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 ADKP55263 362 aaKnown RBP13.39□□□□□ -0.27
PRPF39-203ENST00000477626 JAM2P57087 298 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 RAD51AP2Q09MP3 1159 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 METTL7BQ6UX53 244 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 TOGARAM2Q6ZUX3 1019 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 SLC35C1Q96A29 364 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 CCDC51Q96ER9 411 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 VPS16Q9H269 839 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 AGPAT3Q9NRZ7 376 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 FBXL5Q9UKA1 691 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 A0A0U1RQJ8 604 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
PRPF39-203ENST00000477626 CASP4P49662 377 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 STIM1Q13586 685 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 ZSWIM2Q8NEG5 633 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
PRPF39-203ENST00000477626 NPEPPSP55786 919 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 C17orf99Q6UX52 265 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 MAP4K3Q8IVH8 894 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 KSR1Q8IVT5 923 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 GPRC5CQ9NQ84 441 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 AJAP1Q9UKB5 411 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-203ENST00000477626 TLL2Q9Y6L7 1015 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 TLR2O60603 784 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 ARHGAP25P42331 645 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-203ENST00000477626 PRKCEQ02156 737 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 TRIM14Q14142 442 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 MTF1Q14872 753 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CDCA2Q69YH5 1023 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CCDC112Q8NEF3 446 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 RASSF8Q8NHQ8 419 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CCL15-CCL14A0A0B4J2E2 113 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 KIF3CO14782 793 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CELF2O95319 508 aaKnown RBP13.38□□□□□ -0.27
PRPF39-203ENST00000477626 HOXC6P09630 235 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CCL15Q16663 113 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 PLPPR4Q7Z2D5 763 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 MMP19Q99542 508 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
PRPF39-203ENST00000477626 GTPBP10A4D1E9 387 aaKnown RBP13.37□□□□□ -0.27
PRPF39-203ENST00000477626 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 SNRPFP62306 86 aaKnown RBP13.37□□□□□ -0.27
PRPF39-203ENST00000477626 LY6KQ17RY6 165 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 CYFIP1Q7L576 1253 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 GPRC5AQ8NFJ5 357 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 PKD2L1Q9P0L9 805 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 PPME1Q9Y570 386 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 ZNF263O14978 683 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 GNA14O95837 355 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 NR3C1P04150 777 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 PSAPP07602 524 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRPF39-203ENST00000477626 NKX3-2P78367 333 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 HSDL1Q3SXM5 330 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-203ENST00000477626 ANKRD35Q8N283 1001 aa13.37□□□□□ -0.27
PRPF39-203ENST00000477626 HVCN1Q96D96 273 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms