RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 E7EWF7 191 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 GPR182O15218 404 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 DDAH1O94760 285 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 ATG7O95352 703 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 ASGR2P07307 311 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 KIF5BP33176 963 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 PTH1RQ03431 593 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 ITIH3Q06033 890 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 ODR4Q5SWX8 454 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 CES5AQ6NT32 575 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 KCNT2Q6UVM3 1135 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 RALYLQ86SE5 291 aaKnown RBP12.99□□□□□ -0.33
BRCA1-213ENST00000476777 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-213ENST00000476777 NKD2Q969F2 451 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-213ENST00000476777 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 MXRA8Q9BRK3 442 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 TMEM117Q9H0C3 514 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
BRCA1-213ENST00000476777 LY9Q9HBG7 655 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 RNF19AQ9NV58 838 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 HCFC2Q9Y5Z7 792 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 IGKV6D-21A0A0A0MT36 114 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 C2orf71A6NGG8 1288 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 PPM1AP35813 382 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 PBX3P40426 434 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 ID4P47928 161 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 SLC26A2P50443 739 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 CLCN5P51795 746 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 KRT17Q04695 432 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-213ENST00000476777 DSC3Q14574 896 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 MCTP2Q6DN12 878 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 TMC7Q7Z402 723 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 FAM228AQ86W67 206 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 MB21D2Q8IYB1 491 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-213ENST00000476777 ADSSL1Q8N142 457 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
BRCA1-213ENST00000476777 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
BRCA1-213ENST00000476777 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
BRCA1-213ENST00000476777 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 HBP1O60381 514 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
BRCA1-213ENST00000476777 GPR32O75388 356 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 CCNE2O96020 404 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 ARP10275 920 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 GNAQP50148 359 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-213ENST00000476777 KIZQ2M2Z5 673 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 LRRC43Q8N309 656 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 ZNF558Q96NG5 402 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 OSMRQ99650 979 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-213ENST00000476777 AGO4Q9HCK5 861 aaKnown RBP12.97□□□□□ -0.33
BRCA1-213ENST00000476777 SPG21Q9NZD8 308 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 LIMD1Q9UGP4 676 aa12.97□□□□□ -0.33
BRCA1-213ENST00000476777 CACNA1GO43497 2377 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 COL1A2P08123 1366 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 HOXA2O43364 376 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 IGHDP01880 384 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 MTHFRP42898 656 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.33
BRCA1-213ENST00000476777 CEP55Q53EZ4 464 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 ABHD15Q6UXT9 468 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
BRCA1-213ENST00000476777 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
BRCA1-213ENST00000476777 MYH9P35579 1960 aaKnown RBP12.95□□□□□ -0.34
BRCA1-213ENST00000476777 MEIS1O00470 390 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 BACH1O14867 736 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 PI15O43692 258 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 C22orf31O95567 290 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 VTNP04004 478 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 RXRAP19793 462 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 ATP4AP20648 1035 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 CLLU1OSQ5K130 101 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
BRCA1-213ENST00000476777 FAM160B1Q5W0V3 765 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
BRCA1-213ENST00000476777 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-213ENST00000476777 SLC39A11Q8N1S5 342 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 C12orf76Q8N812 135 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-213ENST00000476777 USTQ9Y2C2 406 aa12.95□□□□□ -0.34
BRCA1-213ENST00000476777 CACNA1IQ9P0X4 2223 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 CHD8Q9HCK8 2581 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
BRCA1-213ENST00000476777 GSPT1P15170 499 aaKnown RBP12.94□□□□□ -0.34
BRCA1-213ENST00000476777 NPR3P17342 541 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 AAMPQ13685 434 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 ATAT1Q5SQI0 421 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 KANK3Q6NY19 840 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 PDXDC2PQ6P474 469 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms