RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 PSMD10O75832 226 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 STBD1O95210 358 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 EYA4O95677 639 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 IRS1P35568 1242 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 TARBP2Q15633 366 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 SMAD2Q15796 467 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 KIZQ2M2Z5 673 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ZNF274Q96GC6 653 aaPredicted RBP13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CEP89Q96ST8 783 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 SLC26A6Q9BXS9 759 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ELAC1Q9H777 363 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 DISC1Q9NRI5 854 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 MUC6Q6W4X9 2439 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 WDR64B1ANS9 1081 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 LINC01565O15544 149 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 MBTPS2O43462 519 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 VTNP04004 478 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 AKAP17AQ02040 695 aaKnown RBP13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 Q4G0T1 1027 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 PAN2Q504Q3 1202 aaKnown RBP13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ADGRD2Q7Z7M1 963 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ADHFE1Q8IWW8 467 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ZNF710Q8N1W2 664 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 POF1BQ8WVV4 589 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CCDC136Q96JN2 1154 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 FAM167AQ96KS9 214 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 OSMRQ99650 979 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CWH43Q9H720 699 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 RNF19AQ9NV58 838 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CEP131Q9UPN4 1083 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 GINS2Q9Y248 185 aa13.86□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 PLA2G5P39877 138 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CLCN3P51790 818 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 UBE3AQ05086 875 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 UGCGQ16739 394 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 EFCAB12Q6NXP0 572 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 CKAP2LQ8IYA6 745 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 METTL13Q8N6R0 699 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 EFHBQ8N7U6 833 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 DAGLBQ8NCG7 672 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 NIFKQ9BYG3 293 aaKnown RBP13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 UNC45AQ9H3U1 944 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 PCDHA4Q9UN74 947 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 FAM50BQ9Y247 325 aa13.85□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ZNF318Q5VUA4 2279 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 TECTAO75443 2155 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 IGKV6-21A0A0C4DH24 114 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 DENND3A2RUS2 1198 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 GLP2RO95838 553 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 OATP04181 439 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 EIF4BP23588 611 aaKnown RBP13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 SFNP31947 248 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 NLRP11P59045 1033 aaKnown RBP13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 COASYQ13057 564 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 KCNC3Q14003 757 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 MOXD1Q6UVY6 613 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 LRRC55Q6ZSA7 311 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 RDM1Q8NG50 284 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 ETNPPLQ8TBG4 499 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 GJA10Q969M2 543 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 NRBP2Q9NSY0 501 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 TYW1Q9NV66 732 aaKnown RBP13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 PIEZO1Q92508 2521 aa13.84□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.19
MSH5-SAPCD1-205ENST00000476085 FAM86C2PA6NEL3 165 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 PRR33A8MZF0 331 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 FSCN2O14926 492 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 GAS7O60861 476 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 DEXIO95424 95 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 ALADP13716 330 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 GPC3P51654 580 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 JAK3P52333 1124 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 NLRP5P59047 1200 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 PRKCEQ02156 737 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 GALNT17Q6IS24 598 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 TRMT1LQ7Z2T5 733 aaKnown RBP13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 BLIDQ8IZY5 108 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 SMRP1Q8NCR6 262 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 PPP1R16BQ96T49 567 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 IGFLR1Q9H665 355 aa13.83□□□□□ -0.2
MSH5-SAPCD1-205ENST00000476085 CD207Q9UJ71 328 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms