RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 TMOD1P28289 359 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 SARSP49591 514 aaKnown RBP18.22■□□□□ 0.51
ITGB5-205ENST00000474838 FAM228AQ86W67 206 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 ZNF710Q8N1W2 664 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 BANK1Q8NDB2 785 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 WASF1Q92558 559 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 PLVAPQ9BX97 442 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 LMAN2LQ9H0V9 348 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
ITGB5-205ENST00000474838 LRFN2Q9ULH4 789 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 ST3GAL5Q9UNP4 418 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 AKT3Q9Y243 479 aa18.22■□□□□ 0.51
ITGB5-205ENST00000474838 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
ITGB5-205ENST00000474838 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.21■□□□□ 0.51
ITGB5-205ENST00000474838 SLC37A4O43826 429 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 CTDNEP1O95476 244 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 GCFC2P16383 781 aaKnown RBP18.21■□□□□ 0.51
ITGB5-205ENST00000474838 TBC1D8BQ0IIM8 1120 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 LETM2Q2VYF4 491 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 EFCAB12Q6NXP0 572 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 NEK8Q86SG6 692 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 NECAB3Q96P71 396 aaPredicted RBP18.21■□□□□ 0.51
ITGB5-205ENST00000474838 ADAM2Q99965 735 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 NSUN3Q9H649 340 aaKnown RBP18.21■□□□□ 0.51
ITGB5-205ENST00000474838 RGS18Q9NS28 235 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 ORC3Q9UBD5 711 aaPredicted RBP18.21■□□□□ 0.51
ITGB5-205ENST00000474838 WDR81Q562E7 1941 aa18.21■□□□□ 0.51
ITGB5-205ENST00000474838 XKR3Q5GH77 459 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 PPP4R3AQ6IN85 833 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 P2RX5Q93086 422 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 GTF3C6Q969F1 213 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 ADAMTS10Q9H324 1103 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 KCNMB3Q9NPA1 279 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 GJB4Q9NTQ9 266 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
ITGB5-205ENST00000474838 EVPLQ92817 2033 aa18.2■□□□□ 0.5
ITGB5-205ENST00000474838 C9IYK1 514 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 GRM6O15303 877 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 MMP1P03956 469 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
ITGB5-205ENST00000474838 KCNA5P22460 613 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 NLRP11P59045 1033 aaKnown RBP18.19■□□□□ 0.5
ITGB5-205ENST00000474838 COL19A1Q14993 1142 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 TARBP2Q15633 366 aaKnown RBP18.19■□□□□ 0.5
ITGB5-205ENST00000474838 ME3Q16798 604 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 LEXMQ3ZCV2 418 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 PAN2Q504Q3 1202 aaKnown RBP18.19■□□□□ 0.5
ITGB5-205ENST00000474838 TCEAL5Q5H9L2 206 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 OXER1Q8TDS5 423 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 FAM20AQ96MK3 541 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
ITGB5-205ENST00000474838 NIFKQ9BYG3 293 aaKnown RBP18.19■□□□□ 0.5
ITGB5-205ENST00000474838 PCDHB7Q9Y5E2 793 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 MUC3AQ02505 3323 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
ITGB5-205ENST00000474838 DTNBO60941 627 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 LARGE1O95461 756 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 IBSPP21815 317 aaPredicted RBP18.18■□□□□ 0.5
ITGB5-205ENST00000474838 GATMP50440 423 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 PPP2R5CQ13362 524 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 DSC3Q14574 896 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 VAV3Q9UKW4 847 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 BRWD1Q9NSI6 2320 aa18.18■□□□□ 0.5
ITGB5-205ENST00000474838 TBX3O15119 743 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 CCNT1O60563 726 aaKnown RBP18.17■□□□□ 0.5
ITGB5-205ENST00000474838 STBD1O95210 358 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
ITGB5-205ENST00000474838 EIF4BP23588 611 aaKnown RBP18.17■□□□□ 0.5
ITGB5-205ENST00000474838 GPC3P51654 580 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 NEK4P51957 841 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 PSMC5P62195 406 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 MTERF2Q49AM1 385 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 PABPC5Q96DU9 382 aaKnown RBP18.17■□□□□ 0.5
ITGB5-205ENST00000474838 SCLT1Q96NL6 688 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 CEP89Q96ST8 783 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
ITGB5-205ENST00000474838 TMEM161AQ9NX61 479 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 ATG2AQ2TAZ0 1938 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 TCF20Q9UGU0 1960 aaKnown RBP18.17■□□□□ 0.5
ITGB5-205ENST00000474838 BDP1A6H8Y1 2624 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 NCOR1O75376 2440 aa18.17■□□□□ 0.5
ITGB5-205ENST00000474838 TMEM150BA6NC51 233 aa18.16■□□□□ 0.5
ITGB5-205ENST00000474838 NCK2O43639 380 aa18.16■□□□□ 0.5
ITGB5-205ENST00000474838 DARSP14868 501 aaKnown RBP18.16■□□□□ 0.5
ITGB5-205ENST00000474838 KRT2P35908 639 aa18.16■□□□□ 0.5
ITGB5-205ENST00000474838 NSUN7Q8NE18 718 aaKnown RBP18.16■□□□□ 0.5
ITGB5-205ENST00000474838 NEK9Q8TD19 979 aa18.16■□□□□ 0.5
ITGB5-205ENST00000474838 NLRP7Q8WX94 980 aa18.16■□□□□ 0.5
ITGB5-205ENST00000474838 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
ITGB5-205ENST00000474838 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
ITGB5-205ENST00000474838 TBKBP1A7MCY6 615 aa18.15■□□□□ 0.5
ITGB5-205ENST00000474838 EML1O00423 815 aa18.15■□□□□ 0.5
ITGB5-205ENST00000474838 DKC1O60832 514 aaKnown RBP eCLIP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms