RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 NMRK2Q9NPI5 230 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 VPS18Q9P253 973 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 IMPACTQ9P2X3 320 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 AP4E1Q9UPM8 1137 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 ATP6V1DQ9Y5K8 247 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 CORINQ9Y5Q5 1042 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 SYNGAP1Q96PV0 1343 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 GOLGA6L10A0A0M3HER8 536 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 FAM25EA8MYX2 175 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 WDR46O15213 610 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PRC1O43663 620 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 CYTH3O43739 400 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 TADA3O75528 432 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 BBOX1O75936 387 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 DNAJC8O75937 253 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 NPTXRO95502 500 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 VIMP08670 466 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ADH5P11766 374 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 COL8A1P27658 744 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 CSE1LP55060 971 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ARPC4P59998 168 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 UBE2HP62256 183 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 SLFN5Q08AF3 891 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 NSUN2Q08J23 767 aaKnown RBP eCLIP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 SNW1Q13573 536 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC40Q4G0X9 1142 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PLEKHO1Q53GL0 409 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 BMP2KLQ5H9B9 411 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PPM1JQ5JR12 505 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC122Q5T0U0 273 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 LARP1BQ659C4 914 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 SARM1Q6SZW1 724 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PACS1Q6VY07 963 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 CDC37L1Q7L3B6 337 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 CYFIP1Q7L576 1253 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ARHGEF25Q86VW2 580 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PLA2G4DQ86XP0 818 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 LRRC8AQ8IWT6 810 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 LMNTD2Q8IXW0 634 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 MYO1HQ8N1T3 1032 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 SMG8Q8ND04 991 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PPP1R14CQ8TAE6 165 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 AFAP1L1Q8TED9 768 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 KCNN1Q92952 543 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ANAPC16Q96DE5 110 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 SMC6Q96SB8 1091 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 MPHOSPH8Q99549 860 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 FUCA2Q9BTY2 467 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 EIF2AQ9BY44 585 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PARD6BQ9BYG5 372 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 SUGCTQ9HAC7 445 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PICK1Q9NRD5 415 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 TBC1D7Q9P0N9 293 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 C6orf203Q9P0P8 240 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 RABL2AQ9UBK7 228 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ZMAT5Q9UDW3 170 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 DDX20Q9UHI6 824 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ZNRF3Q9ULT6 936 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 HIF3AQ9Y2N7 669 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
GPNMB-209ENST00000474157 PIK3C2GO75747 1445 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 WDR17Q8IZU2 1322 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 ZNF521Q96K83 1311 aa8.03□□□□□ -1.12
GPNMB-209ENST00000474157 RASSF10A6NK89 507 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 TBKBP1A7MCY6 615 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 TMEM110-MUSTN1A8MSY1 372 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 STAM2O75886 525 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 HTR3BO95264 441 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 PTGS1P23219 599 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 TCF7P36402 384 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 AARSP49588 968 aaKnown RBP eCLIP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 ERVK-24P63145 666 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 TUBA4AP68366 448 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 PDE4BQ07343 736 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 RIPK1Q13546 671 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 EIF4A2Q14240 407 aaKnown RBP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 MYBPC3Q14896 1274 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 RCN1Q15293 331 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 LONRF2Q1L5Z9 754 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 CCDC144BQ3MJ40 725 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 AKNAD1Q5T1N1 836 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 CREB3L3Q68CJ9 461 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 FDX2Q6P4F2 183 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 TMEM110Q86TL2 294 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 DRC7Q8IY82 874 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 ARHGAP18Q8N392 663 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 CNNM3Q8NE01 707 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 SMARCC1Q92922 1105 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 SHDQ96IW2 340 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 MRPL46Q9H2W6 279 aaKnown RBP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 RPAP3Q9H6T3 665 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 VCPKMTQ9H867 229 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 VCX3AQ9NNX9 186 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 IL20Q9NYY1 176 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 CRIM1Q9NZV1 1036 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms