RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 GJC2Q5T442 439 aaPredicted RBP16.74■□□□□ 0.27
COL4A5-203ENST00000470339 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 STXBP4Q6ZWJ1 553 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 DAW1Q8N136 415 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 CD99L2Q8TCZ2 262 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 TRIB2Q92519 343 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 P2RX5Q93086 422 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 CEP89Q96ST8 783 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 DHX33Q9H6R0 707 aaKnown RBP16.74■□□□□ 0.27
COL4A5-203ENST00000470339 ATP6V0A4Q9HBG4 840 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 CTNND2Q9UQB3 1225 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 MAPK8IP1Q9UQF2 711 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 NFE2L3Q9Y4A8 694 aa16.74■□□□□ 0.27
COL4A5-203ENST00000470339 UBE4BO95155 1302 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.275e-6■□□□□ 8.9
COL4A5-203ENST00000470339 ADCY6O43306 1168 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 DUSP11O75319 330 aaKnown RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 LGALS2P05162 132 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 MMP3P08254 477 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 CYBAP13498 195 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 PLS3P13797 630 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 SCP2P22307 547 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 CAP1Q01518 475 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 LRRC63Q05C16 580 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 PLCB4Q15147 1175 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 BMT2Q1RMZ1 405 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 MTERF2Q49AM1 385 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 BRDTQ58F21 947 aaPredicted RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 PXYLP1Q8TE99 480 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 NOC3LQ8WTT2 800 aaKnown RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 JPH2Q9BR39 696 aaPredicted RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 NTPCRQ9BSD7 190 aaKnown RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 AP5M1Q9H0R1 490 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 HSD3B7Q9H2F3 369 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 ST6GALNAC4Q9H4F1 302 aa16.73■□□□□ 0.27
COL4A5-203ENST00000470339 MRPL44Q9H9J2 332 aaKnown RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 ZNF215Q9UL58 517 aaPredicted RBP16.73■□□□□ 0.27
COL4A5-203ENST00000470339 SFI1A8K8P3 1242 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
COL4A5-203ENST00000470339 ABCD1P33897 745 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 CPT1AP50416 773 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
COL4A5-203ENST00000470339 NKX3-2P78367 333 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 ZNF484Q5JVG2 852 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 TTI2Q6NXR4 508 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 ZNF720Q7Z2F6 126 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 TLK2Q86UE8 772 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 SLC7A3Q8WY07 619 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 FIZ1Q96SL8 496 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 C16orf70Q9BSU1 422 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 FANCLQ9NW38 375 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 COL1A2P08123 1366 aa16.72■□□□□ 0.27
COL4A5-203ENST00000470339 H3BRB1 525 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 SEPT4O43236 478 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 KPNA6O60684 536 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
COL4A5-203ENST00000470339 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
COL4A5-203ENST00000470339 ZNF18P17022 549 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 STX17P56962 302 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 EMC2Q15006 297 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.27
COL4A5-203ENST00000470339 FAM102BQ5T8I3 360 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TRMT1LQ7Z2T5 733 aaKnown RBP16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TRIM50Q86XT4 487 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TRPV1Q8NER1 839 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 ZNF296Q8WUU4 475 aaPredicted RBP16.71■□□□□ 0.27
COL4A5-203ENST00000470339 SPIRE2Q8WWL2 714 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 KCNN1Q92952 543 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TSG101Q99816 390 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 SH2D3AQ9BRG2 576 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 STRA6Q9BX79 667 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 SEMA6BQ9H3T3 888 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TUT1Q9H6E5 874 aaKnown RBP16.71■□□□□ 0.27
COL4A5-203ENST00000470339 XPNPEP1Q9NQW7 623 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 TBC1D7Q9P0N9 293 aa16.71■□□□□ 0.27
COL4A5-203ENST00000470339 EVPLQ92817 2033 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 ZBTB42B2RXF5 422 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 ADCY3O60266 1144 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 GCNT3O95395 438 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 HMGCRP04035 888 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 DEKP35659 375 aaKnown RBP16.7■□□□□ 0.26
COL4A5-203ENST00000470339 SMTNP53814 917 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 CACNB2Q08289 660 aaPredicted RBP16.7■□□□□ 0.26
COL4A5-203ENST00000470339 LRRC41Q15345 812 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
COL4A5-203ENST00000470339 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 ANKRD40Q6AI12 368 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
COL4A5-203ENST00000470339 UPF3AQ9H1J1 476 aaKnown RBP16.7■□□□□ 0.26
COL4A5-203ENST00000470339 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms