RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 C1QTNF3Q9BXJ4 246 aa6.55□□□□□ -1.36
RBM39-226ENST00000468086 MEGF9Q9H1U4 602 aa6.55□□□□□ -1.36
RBM39-226ENST00000468086 VWA7Q9Y334 891 aa6.55□□□□□ -1.36
RBM39-226ENST00000468086 UBA6A0AVT1 1052 aaPredicted RBP6.54□□□□□ -1.36
RBM39-226ENST00000468086 GPR42O15529 346 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 PRLP01236 227 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 MEOX1P50221 254 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 SESN2P58004 480 aaPredicted RBP6.54□□□□□ -1.36
RBM39-226ENST00000468086 DSG1Q02413 1049 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 TTC38Q5R3I4 469 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 CNNM4Q6P4Q7 775 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 USP30Q70CQ3 517 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 NEIL1Q96FI4 390 aaPredicted RBP6.54□□□□□ -1.36
RBM39-226ENST00000468086 OXSMQ9NWU1 459 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 PTPN22Q9Y2R2 807 aa6.54□□□□□ -1.36
RBM39-226ENST00000468086 PATE3B3GLJ2 98 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 MAFGO15525 162 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 KPNA6O60684 536 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 BCAR1P56945 870 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 SLC6A3Q01959 620 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 OCRLQ01968 901 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 C21orf62-AS1Q17RA5 79 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 AGBL4Q5VU57 503 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 CREB3L3Q68CJ9 461 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 SLFN12LQ6IEE8 588 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 DHX37Q8IY37 1157 aaKnown RBP6.53□□□□□ -1.36
RBM39-226ENST00000468086 RTKN2Q8IZC4 609 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 EFHBQ8N7U6 833 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 LPPQ93052 612 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 ELF4Q99607 663 aaPredicted RBP6.53□□□□□ -1.36
RBM39-226ENST00000468086 OR10A2Q9H208 303 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 SEMA4AQ9H3S1 761 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 CDC42EP3Q9UKI2 254 aa6.53□□□□□ -1.36
RBM39-226ENST00000468086 PMS2P1A4D2B8 440 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 ARHGAP6O43182 974 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 ATP2A2P16615 1042 aaKnown RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 SLC9A1P19634 815 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 SCNN1BP51168 640 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 RRADP55042 308 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 ZXDAP98168 799 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 LRRC32Q14392 662 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 PCOLCEQ15113 449 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 RNF151Q2KHN1 245 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 TIGD7Q6NT04 549 aaPredicted RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 LARP4Q71RC2 724 aaKnown RBP eCLIP6.52□□□□□ -1.37
RBM39-226ENST00000468086 PHYKPLQ8IUZ5 450 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 DVL3Q92997 716 aaPredicted RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 PTPN18Q99952 460 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 TARS2Q9BW92 718 aaKnown RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 KCMF1Q9P0J7 381 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 PUF60Q9UHX1 559 aaKnown RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
RBM39-226ENST00000468086 NR2E1Q9Y466 385 aa6.52□□□□□ -1.37
RBM39-226ENST00000468086 C1QTNF3-AMACRE9PGA6 284 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 CR2P20023 1033 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 MRE11P49959 708 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 SART3Q15020 963 aaKnown RBP6.51□□□□□ -1.37
RBM39-226ENST00000468086 DGKDQ16760 1214 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 GPR158Q5T848 1215 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 FILIP1Q7Z7B0 1213 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 RPGRQ92834 1020 aaKnown RBP6.51□□□□□ -1.37
RBM39-226ENST00000468086 GFM2Q969S9 779 aaKnown RBP6.51□□□□□ -1.37
RBM39-226ENST00000468086 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 TUBGCP5Q96RT8 1024 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 CDK5RAP1Q96SZ6 601 aaKnown RBP6.51□□□□□ -1.37
RBM39-226ENST00000468086 CD248Q9HCU0 757 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 TOMM22Q9NS69 142 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 USP36Q9P275 1121 aaKnown RBP6.51□□□□□ -1.37
RBM39-226ENST00000468086 SAE1Q9UBE0 346 aaPredicted RBP6.51□□□□□ -1.37
RBM39-226ENST00000468086 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 MAPRE3Q9UPY8 281 aa6.51□□□□□ -1.37
RBM39-226ENST00000468086 H2AFYO75367 372 aaKnown RBP6.5□□□□□ -1.37
RBM39-226ENST00000468086 CD40P25942 277 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 HSD3B2P26439 372 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 RGS3P49796 1198 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 PCBP1Q15365 356 aaKnown RBP eCLIP6.5□□□□□ -1.37
RBM39-226ENST00000468086 HS1BP3Q53T59 392 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 KLHDC10Q6PID8 442 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 KANSL1Q7Z3B3 1105 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 BMP8AQ7Z5Y6 402 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 TAX1BP1Q86VP1 789 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
RBM39-226ENST00000468086 NXPE1Q8N323 547 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 OR2W6PQ8NHA6 318 aa6.5□□□□□ -1.37
RBM39-226ENST00000468086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.5□□□□□ -1.37
RBM39-226ENST00000468086 MATN3O15232 486 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 AKAP8O43823 692 aaKnown RBP6.49□□□□□ -1.37
RBM39-226ENST00000468086 ZNF623O75123 536 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 ZNF20P17024 532 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 RPS19P39019 145 aaKnown RBP6.49□□□□□ -1.37
RBM39-226ENST00000468086 KPNA1P52294 538 aaPredicted RBP6.49□□□□□ -1.37
RBM39-226ENST00000468086 GYS2P54840 703 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 SMAD3P84022 425 aaKnown RBP6.49□□□□□ -1.37
RBM39-226ENST00000468086 ICAM4Q14773 271 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 PRAMEF9Q5VWM5 478 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
RBM39-226ENST00000468086 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms