RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 ADAMTS10Q9H324 1103 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 TMX1Q9H3N1 280 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 PRDM12Q9H4Q4 367 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-215ENST00000468018 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 SEPT9Q9UHD8 586 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-215ENST00000468018 PCDHA12Q9UN75 941 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 PPME1Q9Y570 386 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 GTF3C3Q9Y5Q9 886 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 TRANK1O15050 2925 aa17.02■□□□□ 0.31
ATG4B-215ENST00000468018 PRUNE2Q8WUY3 3088 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 EPOPA6NHQ4 379 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 MAFO75444 373 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-215ENST00000468018 SLITRK3O94933 977 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 LYPLA2O95372 231 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 FOSL2P15408 326 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-215ENST00000468018 GPC3P51654 580 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 TBC1D8BQ0IIM8 1120 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 DRP2Q13474 957 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 CUL4AQ13619 759 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 METTL13Q8N6R0 699 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-215ENST00000468018 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 RGL1Q9NZL6 768 aa17.01■□□□□ 0.31
ATG4B-215ENST00000468018 NOC2LQ9Y3T9 749 aaKnown RBP17.01■□□□□ 0.31
ATG4B-215ENST00000468018 LINC01553A4QN01 128 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 TMOD1P28289 359 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 MCM7P33993 719 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
ATG4B-215ENST00000468018 PAK2Q13177 524 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 KIZQ2M2Z5 673 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 NCAPH2Q6IBW4 605 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 FAM228AQ86W67 206 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 C4orf32Q8N8J7 132 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 NEK9Q8TD19 979 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 DYDC2Q96IM9 177 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 MAP7D2Q96T17 732 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 OSMRQ99650 979 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 SH2D3AQ9BRG2 576 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
ATG4B-215ENST00000468018 KIF3AQ9Y496 699 aa17■□□□□ 0.31
ATG4B-215ENST00000468018 MARCH6O60337 910 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 MGEA5O60502 916 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 LPXNO60711 386 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 LINC00271P0C7V0 271 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 GJB2P29033 226 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 YWHABP31946 246 aaKnown RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 TXKP42681 527 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 NLRP11P59045 1033 aaKnown RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 ERVK-21P61565 698 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 TMEM266Q2M3C6 531 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 TTC38Q5R3I4 469 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 PLA2G4FQ68DD2 849 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 FAM117BQ6P1L5 589 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 ZNF689Q96CS4 500 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 GAS2L1Q99501 681 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
ATG4B-215ENST00000468018 ZSWIM4Q9H7M6 989 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 ST3GAL5Q9UNP4 418 aa16.99■□□□□ 0.31
ATG4B-215ENST00000468018 POTEMA6NI47 508 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 OR52Z1P0C646 297 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 EIF4BP23588 611 aaKnown RBP16.98■□□□□ 0.31
ATG4B-215ENST00000468018 NPEPPSP55786 919 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 CYP4A11Q02928 519 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
ATG4B-215ENST00000468018 DSC3Q14574 896 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 ZNF174Q15697 407 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 SUGCTQ9HAC7 445 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 AKT3Q9Y243 479 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
ATG4B-215ENST00000468018 UNC80Q8N2C7 3258 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 ZBTB39O15060 712 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 GPR182O15218 404 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 DGKIO75912 1065 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 ATP2B1P20020 1258 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 CDC42EP1Q00587 391 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 CEP170P1Q96L14 293 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
ATG4B-215ENST00000468018 JPH2Q9BR39 696 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-215ENST00000468018 RGS18Q9NS28 235 aa16.97■□□□□ 0.31
ATG4B-215ENST00000468018 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
ATG4B-215ENST00000468018 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-215ENST00000468018 REV3LO60673 3130 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 C9IYK1 514 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 RFXAPO00287 272 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 UPP2O95045 317 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 DARSP14868 501 aaKnown RBP16.96■□□□□ 0.31
ATG4B-215ENST00000468018 RFC5P40937 340 aa16.96■□□□□ 0.31
ATG4B-215ENST00000468018 NFX1Q12986 1120 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms