RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DLGAP2Q9P1A6 1054 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 SMG5Q9UPR3 1016 aaKnown RBP11.8□□□□□ -0.52
HDAC3-203ENST00000467533 NOC2LQ9Y3T9 749 aaKnown RBP11.8□□□□□ -0.52
HDAC3-203ENST00000467533 PCDHA2Q9Y5H9 948 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 FAM208BQ5VWN6 2430 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 ZMYM6O95789 1325 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 GSTTP1A0A1W2PQM5 241 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 HOXA2O43364 376 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 CXCL14O95715 111 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 SRFP11831 508 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 METAP2P50579 478 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC3-203ENST00000467533 CCDC178Q5BJE1 867 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 PHLDB3Q6NSJ2 640 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 GPR149Q86SP6 731 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 SLC39A11Q8N1S5 342 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 PI4K2BQ8TCG2 481 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 AUTS2Q8WXX7 1259 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
HDAC3-203ENST00000467533 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
HDAC3-203ENST00000467533 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 GPR182O15218 404 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 LAMTOR5O43504 91 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-203ENST00000467533 GBP2P32456 591 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-203ENST00000467533 TRAF1Q13077 416 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 LETM2Q2VYF4 491 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 FAM43BQ6ZT52 329 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-203ENST00000467533 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 NME8Q8N427 588 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 PJA1Q8NG27 643 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 GPR152Q8TDT2 470 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 TNPO1Q92973 898 aaKnown RBP11.78□□□□□ -0.52
HDAC3-203ENST00000467533 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 FOXQ1Q9C009 403 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 ELAC1Q9H777 363 aaKnown RBP11.78□□□□□ -0.52
HDAC3-203ENST00000467533 SPATA6Q9NWH7 488 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-203ENST00000467533 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 ST3GAL5Q9UNP4 418 aa11.78□□□□□ -0.52
HDAC3-203ENST00000467533 SMIM35A0A1B0GVV1 85 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 NT5C1B-RDH14C9J2C7 533 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 KLRF2D3W0D1 207 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 KCNA2P16389 499 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ZNF528Q3MIS6 628 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 PCNX4Q63HM2 1172 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 DCLRE1AQ6PJP8 1040 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 MAML2Q8IZL2 1156 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-203ENST00000467533 VPS52Q8N1B4 723 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ENAHQ8N8S7 591 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-203ENST00000467533 SLC22A17Q8WUG5 538 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 TMEM40Q8WWA1 233 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ATRIPQ8WXE1 791 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 COL26A1Q96A83 441 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 BORCS6Q96GS4 357 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-203ENST00000467533 PPP1R16BQ96T49 567 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ZBP1Q9H171 429 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 GMEB2Q9UKD1 530 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ANGPTL2Q9UKU9 493 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 PCDHGA2Q9Y5H1 932 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 GPR179Q6PRD1 2367 aa11.77□□□□□ -0.53
HDAC3-203ENST00000467533 ATP9AO75110 1047 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 LRRN2O75325 713 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 GLULP15104 373 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 CSTF1Q05048 431 aaKnown RBP11.76□□□□□ -0.53
HDAC3-203ENST00000467533 GIT2Q14161 759 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 PTPN14Q15678 1187 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 MTHFD1LQ6UB35 978 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 PPFIBP1Q86W92 1011 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 SLC44A3Q8N4M1 653 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 RNF169Q8NCN4 708 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 CDHR1Q96JP9 859 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 PIGSQ96S52 555 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 EPC1Q9H2F5 836 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 CDHR5Q9HBB8 845 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 PARD6AQ9NPB6 346 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 RNF19AQ9NV58 838 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 FBXO4Q9UKT5 387 aa11.76□□□□□ -0.53
HDAC3-203ENST00000467533 CACNA1IQ9P0X4 2223 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 A0A0D9SFI3 127 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 B4E1Z4 1266 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 N4BP1O75113 896 aaKnown RBP11.75□□□□□ -0.53
HDAC3-203ENST00000467533 CTSAP10619 480 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 ALDH7A1P49419 539 aaKnown RBP11.75□□□□□ -0.53
HDAC3-203ENST00000467533 BCAR1P56945 870 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 FAM189BP81408 668 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 C15orf39Q6ZRI6 1047 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 FAM228AQ86W67 206 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 SMARCC2Q8TAQ2 1214 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 NETO1Q8TDF5 533 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 STAMQ92783 540 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 GPRASP2Q96D09 838 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 FAM227BQ96M60 508 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 OSMRQ99650 979 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 COL4A3Q01955 1670 aa11.75□□□□□ -0.53
HDAC3-203ENST00000467533 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms