RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 RFC5P40937 340 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 CRYBB1P53674 252 aaPredicted RBP10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 NPEPPSP55786 919 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 WDR5P61964 334 aaKnown RBP10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 CYP4A11Q02928 519 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 TBC1D8BQ0IIM8 1120 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 IKBKEQ14164 716 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 CTTNQ14247 550 aaKnown RBP10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 TMEM266Q2M3C6 531 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 MTERF2Q49AM1 385 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 PLA2G4FQ68DD2 849 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 OTUD6AQ7L8S5 288 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 TPH2Q8IWU9 490 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 PIP4P2Q8N4L2 257 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 ZNF579Q8NAF0 562 aaKnown RBP10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 SLC9A7Q96T83 725 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 ADAMTS10Q9H324 1103 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 ZSCAN16Q9H4T2 348 aaPredicted RBP10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 AGO3Q9H9G7 860 aaKnown RBP10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 SLC4A7Q9Y6M7 1214 aa10.6□□□□□ -0.71
SDCCAG3-208ENST00000466579 TTC3P53804 2025 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 M0QZ92 97 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 ZBTB39O15060 712 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 MED24O75448 989 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 GHRP10912 638 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 CLCN3P51790 818 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 CDC42EP1Q00587 391 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 DRP2Q13474 957 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 DTHD1Q6ZMT9 781 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 TRMT1LQ7Z2T5 733 aaKnown RBP10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 LRRC71Q8N4P6 559 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 METTL13Q8N6R0 699 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 ERMNQ8TAM6 284 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 CEP170P1Q96L14 293 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 MMTAG2Q9BU76 263 aaKnown RBP10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 IFIH1Q9BYX4 1025 aaKnown RBP10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 RAB34Q9BZG1 259 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 ERVK-5Q9HDB9 667 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 LRWD1Q9UFC0 647 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 DBR1Q9UK59 544 aaKnown RBP10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 COL4A6Q14031 1691 aa10.59□□□□□ -0.71
SDCCAG3-208ENST00000466579 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 SLC26A4O43511 780 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 VTNP04004 478 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 ATP2A2P16615 1042 aaKnown RBP10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 RARRES1P49788 294 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 GPC3P51654 580 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 TMEM62Q0P6H9 643 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 PTPAQ15257 358 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 RAB30Q15771 203 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 ECM1Q16610 540 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 HYIQ5T013 277 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 HAUS3Q68CZ6 603 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 FERMT3Q86UX7 667 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 HERC6Q8IVU3 1022 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 CRIPAKQ8N1N5 446 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 KCTD17Q8N5Z5 321 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 TMEM40Q8WWA1 233 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 NACC1Q96RE7 527 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 SH2D3AQ9BRG2 576 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 PBX4Q9BYU1 374 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 XPNPEP1Q9NQW7 623 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 PADI3Q9ULW8 664 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
SDCCAG3-208ENST00000466579 ZBBXA8MT70 800 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 GRXCR1A8MXD5 290 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 DGAT1O75907 488 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 DARSP14868 501 aaKnown RBP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 EIF4BP23588 611 aaKnown RBP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 DNAJB2P25686 324 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 CD52P31358 61 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 KCNJ6P48051 423 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 DNM2P50570 870 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 NLRP11P59045 1033 aaKnown RBP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 DEFB103AP81534 67 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 EMC2Q15006 297 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 KIZQ2M2Z5 673 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 XKR9Q5GH70 373 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 ODR4Q5SWX8 454 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 ZNF410Q86VK4 478 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 FAM228AQ86W67 206 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 LINC01599Q8WXQ3 324 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 SLC7A3Q8WY07 619 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 AK8Q96MA6 479 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 FTHL17Q9BXU8 183 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 SUCLA2Q9P2R7 463 aaPredicted RBP10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 AKT3Q9Y243 479 aa10.57□□□□□ -0.72
SDCCAG3-208ENST00000466579 NOC2LQ9Y3T9 749 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms