RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 KIAA0895Q8NCT3 520 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 NELFBQ8WX92 580 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 KIFAP3Q92845 792 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 HPS3Q969F9 1004 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 JPH2Q9BR39 696 aaPredicted RBP13.43□□□□□ -0.26
VPS16-206ENST00000466415 NIFKQ9BYG3 293 aaKnown RBP13.43□□□□□ -0.26
VPS16-206ENST00000466415 MRPL44Q9H9J2 332 aaKnown RBP13.43□□□□□ -0.26
VPS16-206ENST00000466415 LARSQ9P2J5 1176 aaKnown RBP13.43□□□□□ -0.26
VPS16-206ENST00000466415 TRIM17Q9Y577 477 aa13.43□□□□□ -0.26
VPS16-206ENST00000466415 ARID2Q68CP9 1835 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 BICDL2A1A5D9 508 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 SFI1A8K8P3 1242 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 PPP1R3GB7ZBB8 358 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 SEPT4O43236 478 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 DUSP11O75319 330 aaKnown RBP13.42□□□□□ -0.26
VPS16-206ENST00000466415 GCNT3O95395 438 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 MYL3P08590 195 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 RARBP10826 455 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
VPS16-206ENST00000466415 STX17P56962 302 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 CACNB2Q08289 660 aaPredicted RBP13.42□□□□□ -0.26
VPS16-206ENST00000466415 EHHADHQ08426 723 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 TBC1D8BQ0IIM8 1120 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 IQCB1Q15051 598 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 ODR4Q5SWX8 454 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 GUF1Q8N442 669 aaKnown RBP13.42□□□□□ -0.26
VPS16-206ENST00000466415 TRPV1Q8NER1 839 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 PXYLP1Q8TE99 480 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 DHTKD1Q96HY7 919 aaPredicted RBP13.42□□□□□ -0.26
VPS16-206ENST00000466415 TSG101Q99816 390 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 OLFML3Q9NRN5 406 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 RWDD2AQ9UIY3 292 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 DOCK3Q8IZD9 2030 aa13.42□□□□□ -0.26
VPS16-206ENST00000466415 A6NJR5 290 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 K7ENM7 598 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 GAS2O43903 313 aaKnown RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 ZEB2O60315 1214 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 C6orf222P0C671 652 aaPredicted RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 HOXD8P13378 290 aaPredicted RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 PLS3P13797 630 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 ZNF131P52739 623 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 TRIM32Q13049 653 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 DMP1Q13316 513 aaPredicted RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 LRRC41Q15345 812 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 ZNF484Q5JVG2 852 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 SLC17A8Q8NDX2 589 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 ENOX1Q8TC92 643 aaKnown RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 P2RX5Q93086 422 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
VPS16-206ENST00000466415 POLD4Q9HCU8 107 aa13.41□□□□□ -0.26
VPS16-206ENST00000466415 UBE4BO95155 1302 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 H3BRB1 525 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 CCNE1P24864 410 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
VPS16-206ENST00000466415 SMTNP53814 917 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 IGBP1P78318 339 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 MAPK7Q13164 816 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 ALCAMQ13740 583 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 SPATA1Q5VX52 437 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 KATNAL1Q9BW62 490 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 TUT1Q9H6E5 874 aaKnown RBP13.4□□□□□ -0.26
VPS16-206ENST00000466415 DHX33Q9H6R0 707 aaKnown RBP13.4□□□□□ -0.26
VPS16-206ENST00000466415 GPRC5CQ9NQ84 441 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 WBP1LQ9NX94 342 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 NFE2L3Q9Y4A8 694 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 COL1A2P08123 1366 aa13.4□□□□□ -0.26
VPS16-206ENST00000466415 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.27
VPS16-206ENST00000466415 WDR81Q562E7 1941 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 CCDC169A6NNP5 214 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS16-206ENST00000466415 KPNA6O60684 536 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
VPS16-206ENST00000466415 INHAP05111 366 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 MYBP10242 640 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 MAPTP10636 758 aaKnown RBP13.39□□□□□ -0.27
VPS16-206ENST00000466415 NMT1P30419 496 aaKnown RBP13.39□□□□□ -0.27
VPS16-206ENST00000466415 GRK4P32298 578 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 PEX3P56589 373 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 GJA9P57773 515 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 BEX3Q00994 111 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 PPFIA1Q13136 1202 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 PPP2R5AQ15172 486 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 TARBP2Q15633 366 aaKnown RBP13.39□□□□□ -0.27
VPS16-206ENST00000466415 DAW1Q8N136 415 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 RETREG2Q8NC44 543 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 C16orf70Q9BSU1 422 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 FGFBP2Q9BYJ0 223 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 XPNPEP1Q9NQW7 623 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms