RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PGM5Q15124 567 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 CLUL1Q15846 466 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 SLC35G1Q2M3R5 365 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 VSIG10LQ86VR7 867 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 BLIDQ8IZY5 108 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 NECAB1Q8N987 351 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 GPRASP2Q96D09 838 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 PDCD2LQ9BRP1 358 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 PHF20Q9BVI0 1012 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 ANO3Q9BYT9 981 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 FOXP1Q9H334 677 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-204ENST00000466411 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
CLDN4-204ENST00000466411 ZHX1Q9UKY1 873 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-204ENST00000466411 PCDHGC5Q9Y5F6 944 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 MICAL3Q7RTP6 2002 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 FANCMQ8IYD8 2048 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 BHMG1C9JSJ3 638 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 TK2O00142 265 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 FIBPO43427 364 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 NCK2O43639 380 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 KPNA6O60684 536 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 MMP1P03956 469 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 CYP3A4P08684 503 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 HOXA13P31271 388 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 ICAM3P32942 547 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 ANP32AP39687 249 aaKnown RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 TRAPPC10P48553 1259 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 HTRA4P83105 476 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 CNTN2Q02246 1040 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 NEDD9Q14511 834 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 NONOQ15233 471 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 EPC2Q52LR7 807 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 FBXO18Q8NFZ0 1043 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 SPIRE2Q8WWL2 714 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 TNPO1Q92973 898 aaKnown RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 INPP4AQ96PE3 977 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 SENP7Q9BQF6 1050 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 VPS54Q9P1Q0 977 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 NOL7Q9UMY1 257 aaKnown RBP7.85□□□□□ -1.15
CLDN4-204ENST00000466411 PCDHA6Q9UN73 950 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 PCDHA8Q9Y5H6 950 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 MYH7BA7E2Y1 1941 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 NLRC5Q86WI3 1866 aa7.85□□□□□ -1.15
CLDN4-204ENST00000466411 ASH1LQ9NR48 2969 aaKnown RBP7.84□□□□□ -1.15
CLDN4-204ENST00000466411 hCG_1642624A0A1W2PR95 340 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
CLDN4-204ENST00000466411 LARGE1O95461 756 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 CTDNEP1O95476 244 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 SUPT20HL2P0C7V6 817 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 EIF2AK2P19525 551 aaKnown RBP7.84□□□□□ -1.15
CLDN4-204ENST00000466411 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLDN4-204ENST00000466411 ZNF76P36508 570 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 ARHGAP4P98171 946 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 TNFAIP2Q03169 654 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 ADAM15Q13444 863 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 MTMR1Q13613 665 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 PTPROQ16827 1216 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 RSPO4Q2I0M5 234 aaPredicted RBP7.84□□□□□ -1.15
CLDN4-204ENST00000466411 DUSP28Q4G0W2 176 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 CEP55Q53EZ4 464 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 USP17L6PQ6QN14 398 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 ADGRD1Q6QNK2 874 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 EP400NLQ6ZTU2 488 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 BRAPQ7Z569 592 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 RDH13Q8NBN7 331 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 EMID1Q96A84 441 aaPredicted RBP7.84□□□□□ -1.15
CLDN4-204ENST00000466411 TAAR1Q96RJ0 339 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 CTAGE1Q96RT6 745 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 AP5M1Q9H0R1 490 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 TBC1D22BQ9NU19 505 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 MRVI1Q9Y6F6 885 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 MAST4O15021 2626 aa7.84□□□□□ -1.15
CLDN4-204ENST00000466411 RALGAPA2Q2PPJ7 1873 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 FRYQ5TBA9 3013 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 LAD1O00515 517 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 TBX3O15119 743 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 LINC01565O15544 149 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 BMP15O95972 392 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 GH1P01241 217 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 CXCL10P02778 98 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 ADRB1P08588 477 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 TXNP10599 105 aaKnown RBP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 MYCLP12524 364 aaPredicted RBP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 GJB2P29033 226 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 CIITAP33076 1130 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 KCNJ6P48051 423 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 ATXN1P54253 815 aaKnown RBP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 LAMC2Q13753 1193 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 FSCN1Q16658 493 aaKnown RBP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 PTPN21Q16825 1174 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 RILPL1Q5EBL4 403 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 TMEM63BQ5T3F8 832 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 LARP1BQ659C4 914 aaKnown RBP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 PPP4R3AQ6IN85 833 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 NEK8Q86SG6 692 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 LAPTM4BQ86VI4 370 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms