RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ZMYM2Q9UBW7 1377 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 A0A087X0T9 212 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 PGRMC1O00264 195 aaKnown RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 POLR3GO15318 223 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 AKAP3O75969 853 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 KIF4AO95239 1232 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SYF2O95926 243 aaKnown RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 GH2P01242 217 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ICAM1P05362 532 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 H2AFZP0C0S5 128 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 TMEM253P0C7T8 217 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 FAM228BP0C875 321 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 KLRC1P26715 233 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 STAT1P42224 750 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SKOR1P84550 965 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ATP2B2Q01814 1243 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RASSF7Q02833 373 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 GFPT1Q06210 699 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 CETN1Q12798 172 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 MTMR3Q13615 1198 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 DOK7Q18PE1 504 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ALKBH5Q6P6C2 394 aaKnown RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 H2AFVQ71UI9 128 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 INTS8Q75QN2 995 aaKnown RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 KIAA0825Q8IV33 1275 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RHOT2Q8IXI1 618 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 USP38Q8NB14 1042 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 C3orf20Q8ND61 904 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 FAM76AQ8TAV0 307 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SMCR8Q8TEV9 937 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RFFLQ8WZ73 363 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SEC14L1Q92503 715 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 TBC1D5Q92609 795 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 LRRC45Q96CN5 670 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RUNDC3BQ96NL0 473 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RUFY1Q96T51 708 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SYT11Q9BT88 431 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 TEKT3Q9BXF9 490 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 STK33Q9BYT3 514 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 CARD9Q9H257 536 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 BHMT2Q9H2M3 363 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 DBNDD1Q9H9R9 158 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 MLXIPQ9HAP2 919 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 C17orf75Q9HAS0 396 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SIX2Q9NPC8 291 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 TBC1D7Q9P0N9 293 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 GCNT4Q9P109 453 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 KCNG1Q9UIX4 513 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ZHX1Q9UKY1 873 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ZBTB21Q9ULJ3 1066 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 FRMD4BQ9Y2L6 1034 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 DUSP10Q9Y6W6 482 aa7.48□□□□□ -1.21
CDHR3-204ENST00000466351 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
CDHR3-204ENST00000466351 RLFQ13129 1914 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 GOLGA6CA6NDK9 693 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 MIF4GDA9UHW6 222 aaKnown RBP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 F8VZ95 297 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 WDR46O15213 610 aaKnown RBP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 TGFB1I1O43294 461 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 DKC1O60832 514 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 GAS7O60861 476 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 HSF2BPO75031 334 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 SRGAP2O75044 1071 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 PPFIA4O75335 1185 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 PALMO75781 387 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 MTA2O94776 668 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 GCNT3O95395 438 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 GOLGA6DP0CG33 693 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 CAPN2P17655 700 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 SFNP31947 248 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 HOXD13P35453 343 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 SOX5P35711 763 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 ZNF76P36508 570 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 HSPA9P38646 679 aaKnown RBP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 TNNT3P45378 269 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 LMAN1P49257 510 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 FMO5P49326 533 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 CASP5P51878 434 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 RBM5P52756 815 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 PTK2Q05397 1052 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 C2orf54Q08AI8 447 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 IKQ13123 557 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-204ENST00000466351 KIF22Q14807 665 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 LRRC41Q15345 812 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 RPS6KA1Q15418 735 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 CFAP58Q5T655 872 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 PCNX4Q63HM2 1172 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 C11orf63Q6NUN7 778 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 NFRKBQ6P4R8 1299 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 ZNF720Q7Z2F6 126 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 MAATS1Q7Z4T9 603 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 CROCCP2Q86T23 111 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 USP37Q86T82 979 aa7.47□□□□□ -1.21
CDHR3-204ENST00000466351 ZFPM1Q8IX07 1006 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms