RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 ZWILCHQ9H900 591 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 PYCARDQ9ULZ3 195 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 SEPT6Q14141 434 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 SGO2Q562F6 1265 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
NUP58-206ENST00000463407 TTC31Q49AM3 519 aaPredicted RBP13.81□□□□□ -0.2
NUP58-206ENST00000463407 LPAR1Q92633 364 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 HDAC11Q96DB2 347 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 SOWAHDA6NJG2 315 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 GOLGA8KD6RF30 607 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 DYNC1LI2O43237 492 aaPredicted RBP13.81□□□□□ -0.2
NUP58-206ENST00000463407 NOL3O60936 208 aaKnown RBP13.81□□□□□ -0.2
NUP58-206ENST00000463407 KCNJ6P48051 423 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 GUCY2DQ02846 1103 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 AFG1LQ8WV93 481 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 NDST4Q9H3R1 872 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 THOC5Q13769 683 aaKnown RBP13.81□□□□□ -0.2
NUP58-206ENST00000463407 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
NUP58-206ENST00000463407 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
NUP58-206ENST00000463407 KDM6AO15550 1401 aaPredicted RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 CPP00450 1065 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 RCAN1P53805 252 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 EIF2AK1Q9BQI3 630 aaKnown RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 JPH1Q9HDC5 661 aaPredicted RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 ZC3H13Q5T200 1668 aaKnown RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 PSMA2P25787 234 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 PDE1BQ01064 536 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 TKFCQ3LXA3 575 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 FAM151AQ8WW52 585 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 C6orf222P0C671 652 aaPredicted RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
NUP58-206ENST00000463407 DCLK2Q8N568 766 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 ANKRD20A3Q5VUR7 823 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 MB21D1Q8N884 522 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 ACRBPQ8NEB7 543 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 LRRD1A4D1F6 860 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 TROVE2P10155 538 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUP58-206ENST00000463407 PCDHA13Q9Y5I0 950 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 PCDHA10Q9Y5I2 948 aa13.8□□□□□ -0.2
NUP58-206ENST00000463407 COASYQ13057 564 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 RAB44Q7Z6P3 723 aaPredicted RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 CABS1Q96KC9 395 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 MTMR4Q9NYA4 1195 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 NR3C1P04150 777 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 STAT5BP51692 787 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 KRT33BQ14525 404 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 VSTM4Q8IW00 320 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 ABCF3Q9NUQ8 709 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 POC1B-GALNT4F8VUJ3 575 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 TDP2O95551 362 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 INHBAP08476 426 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 CPB1P15086 417 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 KATNAL1Q9BW62 490 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 RNF40O75150 1001 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 GCLMP48507 274 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 USP11P51784 963 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 BASP1P80723 227 aaKnown RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 ZBED6P86452 979 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 SPTLC3Q9NUV7 552 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 FTCDO95954 541 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 MYLK4Q86YV6 388 aaPredicted RBP13.79□□□□□ -0.2
NUP58-206ENST00000463407 NDUFAF2Q8N183 169 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 MCUQ8NE86 351 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 CHMP6Q96FZ7 201 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 MOSPD1Q9UJG1 213 aa13.79□□□□□ -0.2
NUP58-206ENST00000463407 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 KRT31Q15323 416 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 RECQLP46063 649 aaPredicted RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 SATB1Q01826 763 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 NGRNQ9NPE2 291 aaKnown RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 DNAJC12Q9UKB3 198 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 PIN4Q9Y237 131 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms