RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 COL4A6Q14031 1691 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 FNDC1Q4ZHG4 1894 aaPredicted RBP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 RBAK-RBAKDNI3L0D1 243 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 TBX3O15119 743 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 DKC1O60832 514 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 BAG4O95429 457 aaKnown RBP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 CTDNEP1O95476 244 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 TDP2O95551 362 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 OATP04181 439 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 CTNNB1P35222 781 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 DNM2P50570 870 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 NEK4P51957 841 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 NLRP11P59045 1033 aaKnown RBP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 TFF2Q03403 129 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 TARBP2Q15633 366 aaKnown RBP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 ME3Q16798 604 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 INF2Q27J81 1249 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 KIZQ2M2Z5 673 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 TMEM266Q2M3C6 531 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 LETM2Q2VYF4 491 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 XKR3Q5GH77 459 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 NEK8Q86SG6 692 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 LINC01465Q8N7H1 131 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 BANK1Q8NDB2 785 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 ETNPPLQ8TBG4 499 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 LINC01599Q8WXQ3 324 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 P2RX5Q93086 422 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 MAP7D2Q96T17 732 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 ADAM2Q99965 735 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 C11orf84Q9BUA3 381 aaPredicted RBP8.2□□□□□ -1.1
PTPRF-210ENST00000463041 ADAMTS10Q9H324 1103 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 AKT3Q9Y243 479 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 ADGRA3Q8IWK6 1321 aa8.2□□□□□ -1.1
PTPRF-210ENST00000463041 DENND3A2RUS2 1198 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 C9IYK1 514 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 CHMP2AO43633 222 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 MARCH6O60337 910 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 STBD1O95210 358 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 VTNP04004 478 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 LINC00271P0C7V0 271 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 FDPSP14324 419 aaKnown RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 ZSCAN20P17040 1043 aaPredicted RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 EIF4BP23588 611 aaKnown RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 PSMC5P62195 406 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 PRKCEQ02156 737 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 PPP2R5CQ13362 524 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 UGCGQ16739 394 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 PUS10Q3MIT2 529 aaKnown RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 TIGD5Q53EQ6 642 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 FAM228AQ86W67 206 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 EXOC8Q8IYI6 725 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 NECAB1Q8N987 351 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 TMEM40Q8WWA1 233 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 GTF3C6Q969F1 213 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 GJA10Q969M2 543 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 OSMRQ99650 979 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 JPH2Q9BR39 696 aaPredicted RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 NSUN3Q9H649 340 aaKnown RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 ELAC1Q9H777 363 aaKnown RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 UBE2ZQ9H832 354 aaPredicted RBP8.19□□□□□ -1.1
PTPRF-210ENST00000463041 BRMS1Q9HCU9 246 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 KCNMB3Q9NPA1 279 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 PLAGL2Q9UPG8 496 aa8.19□□□□□ -1.1
PTPRF-210ENST00000463041 COL4A4P53420 1690 aaPredicted RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 IGKV6-21A0A0C4DH24 114 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 GRM6O15303 877 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 MGEA5O60502 916 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 CCNT1O60563 726 aaKnown RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 MAFO75444 373 aaPredicted RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 SEC24BO95487 1268 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 DARSP14868 501 aaKnown RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 KRT2P35908 639 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 QARSP47897 775 aaKnown RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 KCNQ1P51787 676 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 CLCN3P51790 818 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 DSC3Q14574 896 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 EPHA7Q15375 998 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 LEXMQ3ZCV2 418 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 PIK3AP1Q6ZUJ8 805 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 OTUD6AQ7L8S5 288 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 SLFN12Q8IYM2 578 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 LRRC71Q8N4P6 559 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 SPPL3Q8TCT6 385 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 HAS1Q92839 578 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 PABPC5Q96DU9 382 aaKnown RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 INO80BQ9C086 356 aaPredicted RBP8.18□□□□□ -1.1
PTPRF-210ENST00000463041 ATP6V0A4Q9HBG4 840 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 CHST12Q9NRB3 414 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 GJB4Q9NTQ9 266 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 TMEM161AQ9NX61 479 aa8.18□□□□□ -1.1
PTPRF-210ENST00000463041 LIMCH1Q9UPQ0 1083 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms