RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ITGB5P18084 799 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 G3BP1Q13283 466 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBE4B-204ENST00000462658 OS9Q13438 667 aaPredicted RBP8.91□□□□□ -0.98
UBE4B-204ENST00000462658 FAM209AQ5JX71 171 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 MBLAC2Q68D91 279 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 NSMFQ6X4W1 530 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 CCDC103Q8IW40 242 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 KCTD13Q8WZ19 329 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 KIF1BPQ96EK5 621 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 CCDC140Q96MF4 163 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 PLA2G12BQ9BX93 195 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 IMPACTQ9P2X3 320 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 NARFQ9UHQ1 456 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 PA2G4Q9UQ80 394 aaKnown RBP8.91□□□□□ -0.98
UBE4B-204ENST00000462658 NIP7Q9Y221 180 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBE4B-204ENST00000462658 AFDNP55196 1824 aaKnown RBP8.9□□□□□ -0.98
UBE4B-204ENST00000462658 A0A1W2PQ45 241 aaPredicted RBP8.9□□□□□ -0.98
UBE4B-204ENST00000462658 A0A1W2PQY0 241 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 BLACEA4D250 179 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 BIN1O00499 593 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 L1CAMP32004 1257 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 RFC4P35249 363 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 RFX5P48382 616 aaPredicted RBP8.9□□□□□ -0.98
UBE4B-204ENST00000462658 SLC15A2Q16348 729 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 INF2Q27J81 1249 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 SLC35F1Q5T1Q4 408 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 PPIL6Q8IXY8 311 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 LILRA2Q8N149 483 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 SYNE4Q8N205 404 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 SHISA4Q96DD7 197 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 CDC6Q99741 560 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 UTP14AQ9BVJ6 771 aaKnown RBP8.9□□□□□ -0.98
UBE4B-204ENST00000462658 SRP68Q9UHB9 627 aaKnown RBP8.9□□□□□ -0.98
UBE4B-204ENST00000462658 TAF6LQ9Y6J9 622 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 C4BP0C0L5 1744 aa8.9□□□□□ -0.98
UBE4B-204ENST00000462658 PNPLA7Q6ZV29 1317 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 WTIPA6NIX2 430 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-204ENST00000462658 IRS4O14654 1257 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-204ENST00000462658 MEFVO15553 781 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-204ENST00000462658 PDE8AO60658 829 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 CSF1RP07333 972 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 MAP4K2Q12851 820 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 GALNT18Q6P9A2 607 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 NLRX1Q86UT6 975 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 ZSWIM9Q86XI8 627 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 NUP43Q8NFH3 380 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 KLHDC4Q8TBB5 520 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 OTUD7AQ8TE49 926 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-204ENST00000462658 FAM168AQ92567 244 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 EXOC2Q96KP1 924 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 SIL1Q9H173 461 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 IL1RAPL2Q9NP60 686 aa8.89□□□□□ -0.99
UBE4B-204ENST00000462658 SH3TC1Q8TE82 1336 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 C7orf72A4D263 438 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 NTSR2O95665 410 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
UBE4B-204ENST00000462658 PRKCAP17252 672 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 NTRK3Q16288 839 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 KCNMB1Q16558 191 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 CCDC57Q2TAC2 916 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 C2orf27AQ580R0 203 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 TMEM67Q5HYA8 995 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 TBC1D9BQ66K14 1250 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 USP53Q70EK8 1073 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 SH3TC2Q8TF17 1288 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 THAP3Q8WTV1 239 aaPredicted RBP8.88□□□□□ -0.99
UBE4B-204ENST00000462658 MMP19Q99542 508 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 PTCH2Q9Y6C5 1203 aa8.88□□□□□ -0.99
UBE4B-204ENST00000462658 NUP98P52948 1817 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 USP42Q9H9J4 1324 aaKnown RBP8.87□□□□□ -0.99
UBE4B-204ENST00000462658 TRBV23-1A0A0A0MS06 115 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 PPP1R11O60927 126 aaPredicted RBP8.87□□□□□ -0.99
UBE4B-204ENST00000462658 SASH1O94885 1247 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 ZBTB7AO95365 584 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 LCP1P13796 627 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 PDE1AP54750 535 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 CTSWP56202 376 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 MVKQ03426 396 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 IFIT5Q13325 482 aaKnown RBP8.87□□□□□ -0.99
UBE4B-204ENST00000462658 BMP2KLQ5H9B9 411 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 CLASRPQ8N2M8 674 aaKnown RBP8.87□□□□□ -0.99
UBE4B-204ENST00000462658 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 TTLL11Q8NHH1 800 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 DIO2Q92813 273 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 GULP1Q9UBP9 304 aa8.87□□□□□ -0.99
UBE4B-204ENST00000462658 GOLGB1Q14789 3259 aaKnown RBP8.87□□□□□ -0.99
UBE4B-204ENST00000462658 C4AP0C0L4 1744 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 TRBV23OR9-2A0A075B6M9 112 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 A0A1W2PQ27 194 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 A0A1W2PQ64 194 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 A0A1W2PQC6 194 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 GLI1P08151 1106 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 JUNBP17275 347 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-204ENST00000462658 MX1P20591 662 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 SDHBP21912 280 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms