RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 ASGR2P07307 311 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 SEPHS1P49903 392 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 HTRA3P83110 453 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 GORABQ5T7V8 394 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 CCDC81Q6ZN84 652 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 ADAT2Q7Z6V5 191 aaKnown RBP7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 FILIP1Q7Z7B0 1213 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 B3GNT8Q7Z7M8 397 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 LZTR1Q8N653 840 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 NETO2Q8NC67 525 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 GPRASP2Q96D09 838 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 PEX11GQ96HA9 241 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 MIS18AQ9NYP9 233 aa7.01□□□□□ -1.29
THUMPD3-207ENST00000461636 CACNA1FO60840 1977 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 KIF13BQ9NQT8 1826 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 PRAMEF22A3QJZ6 481 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 SH3D21A4FU49 640 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 TPD52L2O43399 206 aaKnown RBP7□□□□□ -1.29
THUMPD3-207ENST00000461636 PARNO95453 639 aaKnown RBP7□□□□□ -1.29
THUMPD3-207ENST00000461636 MC3RP41968 323 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 CRKLP46109 303 aaKnown RBP7□□□□□ -1.29
THUMPD3-207ENST00000461636 EIF6P56537 245 aaKnown RBP7□□□□□ -1.29
THUMPD3-207ENST00000461636 AMPD2Q01433 879 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 EFEMP1Q12805 493 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 SLC9A5Q14940 896 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 RTP5Q14D33 572 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 UBXN11Q5T124 520 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 ZFYVE27Q5T4F4 411 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 NT5DC1Q5TFE4 455 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 LRP10Q7Z4F1 713 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
THUMPD3-207ENST00000461636 OR6P1Q8NGX9 317 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 MKL1Q969V6 931 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 SPATA25Q9BR10 227 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 KLHL25Q9H0H3 589 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 PCDH12Q9NPG4 1184 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 STK32BQ9NY57 414 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 CNOT11Q9UKZ1 510 aaKnown RBP7□□□□□ -1.29
THUMPD3-207ENST00000461636 PLA2G2DQ9UNK4 145 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 HDAC5Q9UQL6 1122 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 BACE2Q9Y5Z0 518 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 NRXN2Q9P2S2 1712 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 LTBP3Q9NS15 1303 aa7□□□□□ -1.29
THUMPD3-207ENST00000461636 DNAJC6O75061 913 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 RPS6KA4O75676 772 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 PMLP29590 882 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 EIF5P55010 431 aaKnown RBP6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 NFKB2Q00653 900 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 SLC7A5Q01650 507 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 PAK2Q13177 524 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 SMIM5Q71RC9 77 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 COL23A1Q86Y22 540 aaPredicted RBP6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 ADGRG2Q8IZP9 1017 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 TTC5Q8N0Z6 440 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 SPC25Q9HBM1 224 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 GINM1Q9NU53 330 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 ZBTB1Q9Y2K1 713 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 RWDD3Q9Y3V2 267 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 USP16Q9Y5T5 823 aa6.99□□□□□ -1.29
THUMPD3-207ENST00000461636 KIAA1551Q9HCM1 1747 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 COL15A1P39059 1388 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 A0A1B0GTL3 188 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 PPP1R12AO14974 1030 aaPredicted RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 SSBP05455 408 aaKnown RBP eCLIP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 SNRPA1P09661 255 aaKnown RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 GJA9P57773 515 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 GRB10Q13322 594 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 SERINC3Q13530 473 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 KRT24Q2M2I5 525 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 ZNF526Q8TF50 670 aaPredicted RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 YTHDC1Q96MU7 727 aaKnown RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 TMX1Q9H3N1 280 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 PRKAB1Q9Y478 270 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 NUP98P52948 1817 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 AFDNP55196 1824 aaKnown RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 KIF16BQ96L93 1317 aa6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 USP42Q9H9J4 1324 aaKnown RBP6.98□□□□□ -1.29
THUMPD3-207ENST00000461636 C2orf71A6NGG8 1288 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 K7ESM1 405 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 PRICKLE3O43900 615 aaPredicted RBP6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 ZBTB7AO95365 584 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 STARD3NLO95772 234 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 EPHX1P07099 455 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 PAMP19021 973 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 IL6STP40189 918 aaPredicted RBP6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 SOX9P48436 509 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 KRTAP10-2P60368 255 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 DPY19L1Q2PZI1 675 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 CCDC30Q5VVM6 783 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 USP33Q8TEY7 942 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 CPA5Q8WXQ8 436 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 MCMBPQ9BTE3 642 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 STK31Q9BXU1 1019 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 MTFR1LQ9H019 292 aa6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 SLKQ9H2G2 1235 aaPredicted RBP6.97□□□□□ -1.29
THUMPD3-207ENST00000461636 RXFP1Q9HBX9 757 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms