RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 XPNPEP1Q9NQW7 623 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 TMEM39AQ9NV64 488 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 CCDC39Q9UFE4 941 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 HPSEQ9Y251 543 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 LTBP2Q14767 1821 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 A0A1B0GVL5 298 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 RBAK-RBAKDNI3L0D1 243 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 RFC5P40937 340 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 SLC12A3P55017 1021 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 TAF2Q6P1X5 1199 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 TRAF7Q6Q0C0 670 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 PADI6Q6TGC4 694 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 LRRC71Q8N4P6 559 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 PDILTQ8N807 584 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 SYT2Q8N9I0 419 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-202ENST00000461433 DNAJB3Q8WWF6 145 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 RAD54LQ92698 747 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 NOD1Q9Y239 953 aa12.56□□□□□ -0.4
SSBP1-202ENST00000461433 GADD45BO75293 160 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-202ENST00000461433 DGAT1O75907 488 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 PLA2G4BP0C869 781 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 CKBP12277 381 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 PFKFB1P16118 471 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 TXLNAP40222 546 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 CLCN3P51790 818 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 MCM6Q14566 821 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 EMC2Q15006 297 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 ARSHQ5FYA8 562 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 RINT1Q6NUQ1 792 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 C1orf186Q6ZWK4 172 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 RUSC1Q9BVN2 902 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 TANC1Q9C0D5 1861 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 FAM49AQ9H0Q0 323 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-202ENST00000461433 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 BMP2KQ9NSY1 1161 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-202ENST00000461433 STK17AQ9UEE5 414 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 KCNH3Q9ULD8 1083 aa12.55□□□□□ -0.4
SSBP1-202ENST00000461433 ARHGEF35A5YM69 484 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
SSBP1-202ENST00000461433 USO1O60763 962 aaKnown RBP12.54□□□□□ -0.4
SSBP1-202ENST00000461433 CYP11B2P19099 503 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 NDUFA8P51970 172 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 POLGP54098 1239 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-202ENST00000461433 GPNMBQ14956 572 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 FAM26DQ5JW98 314 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 ZNF618Q5T7W0 954 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 CAGE1Q8TC20 777 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 SLC7A3Q8WY07 619 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
SSBP1-202ENST00000461433 TMEM143Q96AN5 459 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 HIPK3Q9H422 1215 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-202ENST00000461433 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 SCN5AQ14524 2016 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 TIMP1P01033 207 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 CHRNA1P02708 482 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 VTNP04004 478 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 SYN1P17600 705 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 CYP2C18P33260 490 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 THPOP40225 353 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 STAT6P42226 847 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 MGAT3Q09327 533 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 BFSP2Q13515 415 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 EXOC8Q8IYI6 725 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 NME8Q8N427 588 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 FSIP1Q8NA03 581 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 DHX58Q96C10 678 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 VWCEQ96DN2 955 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 MTRQ99707 1265 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 JPH2Q9BR39 696 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-202ENST00000461433 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 POLD4Q9HCU8 107 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
SSBP1-202ENST00000461433 GAS2O43903 313 aaKnown RBP12.53□□□□□ -0.4
SSBP1-202ENST00000461433 CAND2O75155 1236 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 GPR32O75388 356 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 TMOD1P28289 359 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 ARL2P36404 184 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 TMEM62Q0P6H9 643 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 MBTPS1Q14703 1052 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 IER5Q5VY09 327 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 DAW1Q8N136 415 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
SSBP1-202ENST00000461433 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms