RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 CDY2AQ9Y6F7 541 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 NBNO60934 754 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 MAFO75444 373 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-206ENST00000459895 MUTP22033 750 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 RFC5P40937 340 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 KRT85P78386 507 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 NUCB2P80303 420 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-206ENST00000459895 GPNMBQ14956 572 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
COL18A1-206ENST00000459895 KIAA0319LQ8IZA0 1049 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 TMEM199Q8N511 208 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 SLC7A3Q8WY07 619 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 PLIN2Q99541 437 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 PRO3102Q9H379 93 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 DHX33Q9H6R0 707 aaKnown RBP14.31□□□□□ -0.12
COL18A1-206ENST00000459895 ANKEF1Q9NU02 776 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 DBR1Q9UK59 544 aaKnown RBP14.31□□□□□ -0.12
COL18A1-206ENST00000459895 KIAA1024Q9UPX6 916 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 PPME1Q9Y570 386 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 TRPV2Q9Y5S1 764 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 STK24Q9Y6E0 443 aa14.31□□□□□ -0.12
COL18A1-206ENST00000459895 RSPH10B2B2RC85 870 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 E9PMD0 336 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 MAGEB2O15479 319 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 PPP6R2O75170 966 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 CHRNA1P02708 482 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 RSPH10BP0C881 870 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 ACRP10323 421 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 PLCG1P19174 1290 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.125e-22■■■■□ 21.5
COL18A1-206ENST00000459895 TCTN1Q2MV58 587 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 FAM26DQ5JW98 314 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 ATL3Q6DD88 541 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 EFCAB12Q6NXP0 572 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 OTUD6AQ7L8S5 288 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 DEFB128Q7Z7B8 93 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 RSPH3Q86UC2 560 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 LEO1Q8WVC0 666 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-206ENST00000459895 EPSTI1Q96J88 318 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 CDK5RAP3Q96JB5 506 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 MAP7D2Q96T17 732 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 BHMT2Q9H2M3 363 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 ATP6V0A4Q9HBG4 840 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 IL23AQ9NPF7 189 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-206ENST00000459895 AKT3Q9Y243 479 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 MYH11P35749 1972 aa14.3□□□□□ -0.12
COL18A1-206ENST00000459895 A0A087X0B3 334 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 RPLP2P05387 115 aaKnown RBP14.29□□□□□ -0.12
COL18A1-206ENST00000459895 GHRP10912 638 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 RFC2P35250 354 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 UBA7P41226 1012 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 C9orf50Q5SZB4 431 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 TMEM40Q8WWA1 233 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 ZNF668Q96K58 619 aaPredicted RBP14.29□□□□□ -0.12
COL18A1-206ENST00000459895 NACC1Q96RE7 527 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 OSMRQ99650 979 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 MTRQ99707 1265 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.29□□□□□ -0.124e-21■■□□□ 13.8
COL18A1-206ENST00000459895 RUSC1Q9BVN2 902 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
COL18A1-206ENST00000459895 NT5C3AQ9H0P0 336 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 SUGCTQ9HAC7 445 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 CFAP45Q9UL16 551 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 LAMA3Q16787 3333 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 COL4A6Q14031 1691 aa14.29□□□□□ -0.12
COL18A1-206ENST00000459895 M0QZ92 97 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 DGAT1O75907 488 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 EYA4O95677 639 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 CXCL10P02778 98 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 ME1P48163 572 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 GPC3P51654 580 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 LPIN1Q14693 890 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
COL18A1-206ENST00000459895 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
COL18A1-206ENST00000459895 SHC4Q6S5L8 630 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 PADI6Q6TGC4 694 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 CALML4Q96GE6 196 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 SPATA32Q96LK8 384 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 CCSER1Q9C0I3 900 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 POLR3FQ9H1D9 316 aaPredicted RBP14.28□□□□□ -0.12
COL18A1-206ENST00000459895 GPRC5CQ9NQ84 441 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 BLOC1S4Q9NUP1 217 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 PCDHA7Q9UN72 937 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 GINS2Q9Y248 185 aa14.28□□□□□ -0.12
COL18A1-206ENST00000459895 LAMA2P24043 3122 aaKnown RBP14.28□□□□□ -0.12
COL18A1-206ENST00000459895 SLC26A4O43511 780 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms