RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 CLUL1Q15846 466 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 TIGD7Q6NT04 549 aaPredicted RBP5.36□□□□□ -1.55
VPS8-211ENST00000452140 SYDE1Q6ZW31 735 aaPredicted RBP5.36□□□□□ -1.55
VPS8-211ENST00000452140 TMEFF1Q8IYR6 380 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 C1orf162Q8NEQ5 155 aaPredicted RBP5.36□□□□□ -1.55
VPS8-211ENST00000452140 BHLHE22Q8NFJ8 381 aaPredicted RBP5.36□□□□□ -1.55
VPS8-211ENST00000452140 E2F7Q96AV8 911 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 EAF2Q96CJ1 260 aaPredicted RBP5.36□□□□□ -1.55
VPS8-211ENST00000452140 HOOK2Q96ED9 719 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 FUBP3Q96I24 572 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS8-211ENST00000452140 FAM84AQ96KN4 292 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 CLIC6Q96NY7 704 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 USP36Q9P275 1121 aaKnown RBP5.36□□□□□ -1.55
VPS8-211ENST00000452140 EID1Q9Y6B2 187 aa5.36□□□□□ -1.55
VPS8-211ENST00000452140 SHTN1A0MZ66 631 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 MARCH6O60337 910 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 PCDH8O95206 1070 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 PI3P19957 117 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 ADCY8P40145 1251 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 RAB27AP51159 221 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 SRSF2Q01130 221 aaKnown RBP5.35□□□□□ -1.55
VPS8-211ENST00000452140 MESP2Q0VG99 397 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 MOGSQ13724 837 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 LRRC41Q15345 812 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 PITRM1Q5JRX3 1037 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 TOR2AQ5JU69 321 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 KIAA1841Q6NSI8 718 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 FAXDC2Q96IV6 333 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 OR10A5Q9H207 317 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 DNAJC28Q9NX36 388 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 MKS1Q9NXB0 559 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 MAGEL2Q9UJ55 1249 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 IRAK3Q9Y616 596 aa5.35□□□□□ -1.55
VPS8-211ENST00000452140 ST20-MTHFSA0A0A6YYL1 179 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 XPOTO43592 962 aaKnown RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA12O60330 932 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 OSMP13725 252 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 ENPP1P22413 925 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 EPHB1P54762 984 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 CCT2P78371 535 aaKnown RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 CD83Q01151 205 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 TRIM25Q14258 630 aaKnown RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 ODF1Q14990 250 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 ACAP2Q15057 778 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 FSCN1Q16658 493 aaKnown RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 UGT8Q16880 541 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 TTLL7Q6ZT98 887 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PNMA8AQ86V59 439 aaPredicted RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 AMOTL1Q8IY63 956 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 KYQ8NBH2 561 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 WDR48Q8TAF3 677 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 CALML6Q8TD86 181 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 CHMP4CQ96CF2 233 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 SIGLEC10Q96LC7 697 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 ACAP3Q96P50 834 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 BTBD2Q9BX70 525 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 MTG2Q9H4K7 406 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 EPB41L4AQ9HCS5 686 aaPredicted RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 KCND1Q9NSA2 647 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 KCNG1Q9UIX4 513 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA8Q9Y5G5 932 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA7Q9Y5G6 932 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA6Q9Y5G7 932 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
VPS8-211ENST00000452140 AKAP10O43572 662 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 CELA3BP08861 270 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 CCND1P24385 295 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 APEX1P27695 318 aaKnown RBP5.33□□□□□ -1.56
VPS8-211ENST00000452140 MLLT6P55198 1093 aaPredicted RBP5.33□□□□□ -1.56
VPS8-211ENST00000452140 PIN1Q13526 163 aaPredicted RBP5.33□□□□□ -1.56
VPS8-211ENST00000452140 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS8-211ENST00000452140 WDR72Q3MJ13 1102 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 KANK2Q63ZY3 851 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 ATG14Q6ZNE5 492 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 KANSL1Q7Z3B3 1105 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 FAM129CQ86XR2 697 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 FMNL3Q8IVF7 1028 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 LINC00482Q8N8I6 264 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 TSR2Q969E8 191 aaKnown RBP5.33□□□□□ -1.56
VPS8-211ENST00000452140 SLC2A13Q96QE2 648 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 RTFDC1Q9BY42 306 aaPredicted RBP5.33□□□□□ -1.56
VPS8-211ENST00000452140 KCTD10Q9H3F6 313 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 ZIM2Q9NZV7 527 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 TCEAL9Q9UHQ7 104 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 TMPRSS11EQ9UL52 423 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 USP18Q9UMW8 372 aa5.33□□□□□ -1.56
VPS8-211ENST00000452140 LUC7L2Q9Y383 392 aaKnown RBP5.33□□□□□ -1.56
VPS8-211ENST00000452140 MYPNQ86TC9 1320 aa5.32□□□□□ -1.56
VPS8-211ENST00000452140 OPHN1O60890 802 aa5.32□□□□□ -1.56
VPS8-211ENST00000452140 SCGB1D2O95969 90 aa5.32□□□□□ -1.56
VPS8-211ENST00000452140 CFBP00751 764 aa5.32□□□□□ -1.56
VPS8-211ENST00000452140 KRT1P04264 644 aa5.32□□□□□ -1.56
VPS8-211ENST00000452140 PFKMP08237 780 aa5.32□□□□□ -1.56
VPS8-211ENST00000452140 RBP3P10745 1247 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms