RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 EPC2Q52LR7 807 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 EARS2Q5JPH6 523 aaKnown RBP17.42■□□□□ 0.38
LIMS1-210ENST00000449684 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 NPAS4Q8IUM7 802 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 SYMPKQ92797 1274 aaKnown RBP17.42■□□□□ 0.38
LIMS1-210ENST00000449684 C8orf76Q96K31 380 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
LIMS1-210ENST00000449684 LMCD1Q9NZU5 365 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 ST3GAL5Q9UNP4 418 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 RWDD3Q9Y3V2 267 aa17.42■□□□□ 0.38
LIMS1-210ENST00000449684 UNC80Q8N2C7 3258 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 P4HBP07237 508 aaKnown RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 CTNNB1P35222 781 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 HMGN5P82970 282 aaKnown RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 PTPROQ16827 1216 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 B3GNT9Q6UX72 402 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 TMEM192Q8IY95 271 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 NLRP7Q8WX94 980 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 JPH2Q9BR39 696 aaPredicted RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 NIFKQ9BYG3 293 aaKnown RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 PCDHB7Q9Y5E2 793 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 PRRC2BQ5JSZ5 2229 aaKnown RBP17.41■□□□□ 0.38
LIMS1-210ENST00000449684 ADGRA3Q8IWK6 1321 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 PRUNE2Q8WUY3 3088 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 LOXHD1Q8IVV2 1947 aa17.41■□□□□ 0.38
LIMS1-210ENST00000449684 EML1O00423 815 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 ST18O60284 1047 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 LPXNO60711 386 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 GPR32O75388 356 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
LIMS1-210ENST00000449684 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 MRPS5P82675 430 aaKnown RBP17.4■□□□□ 0.38
LIMS1-210ENST00000449684 CDC42EP1Q00587 391 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 GPM6BQ13491 265 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 RABEP1Q15276 862 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 EPHA7Q15375 998 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 CALCRLQ16602 461 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 TJAP1Q5JTD0 557 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 RTN4RL1Q86UN2 441 aaPredicted RBP17.4■□□□□ 0.38
LIMS1-210ENST00000449684 TMEM40Q8WWA1 233 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 LINC01599Q8WXQ3 324 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 HAS1Q92839 578 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 ZNF668Q96K58 619 aaPredicted RBP17.4■□□□□ 0.38
LIMS1-210ENST00000449684 ADAM2Q99965 735 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 SH2D3AQ9BRG2 576 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 TMX1Q9H3N1 280 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 C1orf112Q9NSG2 853 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 VAV3Q9UKW4 847 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 PCDHA12Q9UN75 941 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 TRANK1O15050 2925 aa17.4■□□□□ 0.38
LIMS1-210ENST00000449684 WDR81Q562E7 1941 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 TMEM150BA6NC51 233 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 NEMFO60524 1076 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 DGKIO75912 1065 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 SARSP49591 514 aaKnown RBP17.39■□□□□ 0.37
LIMS1-210ENST00000449684 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.37
LIMS1-210ENST00000449684 ST3GAL1Q11201 340 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 AAK1Q2M2I8 961 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 OTUD6AQ7L8S5 288 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 FAM228AQ86W67 206 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 EXOC8Q8IYI6 725 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 TNFRSF25Q93038 417 aa17.39■□□□□ 0.37
LIMS1-210ENST00000449684 COL25A1Q9BXS0 654 aaPredicted RBP17.39■□□□□ 0.37
LIMS1-210ENST00000449684 EIF4BP23588 611 aaKnown RBP17.38■□□□□ 0.37
LIMS1-210ENST00000449684 TARBP2Q15633 366 aaKnown RBP17.38■□□□□ 0.37
LIMS1-210ENST00000449684 PAN2Q504Q3 1202 aaKnown RBP17.38■□□□□ 0.37
LIMS1-210ENST00000449684 SPOUT1Q5T280 376 aaKnown RBP17.38■□□□□ 0.37
LIMS1-210ENST00000449684 PLA2G4FQ68DD2 849 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 SLC24A5Q71RS6 500 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 LINC01465Q8N7H1 131 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 SLC7A3Q8WY07 619 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 CEP170P1Q96L14 293 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 KIF2CQ99661 725 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 LXNQ9BS40 222 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 GCOM2Q9BZD3 368 aaPredicted RBP17.38■□□□□ 0.37
LIMS1-210ENST00000449684 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 RGS18Q9NS28 235 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 SUCLA2Q9P2R7 463 aaPredicted RBP17.38■□□□□ 0.37
LIMS1-210ENST00000449684 COG5Q9UP83 839 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 TTC3P53804 2025 aa17.38■□□□□ 0.37
LIMS1-210ENST00000449684 H3BNC9 293 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 RB1P06400 928 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 BMPR1AP36894 532 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 TXKP42681 527 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 GPC3P51654 580 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 POLGP54098 1239 aaPredicted RBP17.37■□□□□ 0.37
LIMS1-210ENST00000449684 ANO5Q75V66 913 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 RHPN2Q8IUC4 686 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 CMTR2Q8IYT2 770 aaKnown RBP17.37■□□□□ 0.37
LIMS1-210ENST00000449684 HLA-CQ95604 372 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 ZNF689Q96CS4 500 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms