RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 NBR1Q14596 966 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 EPHA7Q15375 998 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 ZNF174Q15697 407 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 KIZQ2M2Z5 673 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 TMEM266Q2M3C6 531 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 MCTP1Q6DN14 999 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 EFCAB12Q6NXP0 572 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 ANO5Q75V66 913 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 LINC01465Q8N7H1 131 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 OSMRQ99650 979 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 PRDM12Q9H4Q4 367 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 SUGCTQ9HAC7 445 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 RGL1Q9NZL6 768 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
LSP1P3-201ENST00000449530 CHD9Q3L8U1 2897 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 POTEMA6NI47 508 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 H3BQV1 296 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 DKC1O60832 514 aaKnown RBP eCLIP13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 UPP2O95045 317 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 OR52Z1P0C646 297 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 TMOD1P28289 359 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 ORC2Q13416 577 aaPredicted RBP13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 TARBP2Q15633 366 aaKnown RBP13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 TJAP1Q5JTD0 557 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 USP38Q8NB14 1042 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 TMEM40Q8WWA1 233 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 LINC01599Q8WXQ3 324 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 ZNF668Q96K58 619 aaPredicted RBP13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 MTMR9Q96QG7 549 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 SQORQ9Y6N5 450 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 COL4A6Q14031 1691 aa13.37□□□□□ -0.27
LSP1P3-201ENST00000449530 RPS6KA5O75582 802 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 U2AF2P26368 475 aaKnown RBP eCLIP13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 NPEPPSP55786 919 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 TAP1Q03518 808 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 DRP2Q13474 957 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 SPRED2Q7Z698 418 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 RAD9AQ99638 391 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 EIF2AK1Q9BQI3 630 aaKnown RBP13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 MYO9BQ13459 2157 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
LSP1P3-201ENST00000449530 TTC3P53804 2025 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 GPR32O75388 356 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 CRYBB1P53674 252 aaPredicted RBP13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 NLRP11P59045 1033 aaKnown RBP13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 FAM228AQ86W67 206 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 TPH2Q8IWU9 490 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 C4orf19Q8IY42 314 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 CEP170P1Q96L14 293 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 YME1L1Q96TA2 773 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 GAS2L1Q99501 681 aaPredicted RBP13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 FTHL17Q9BXU8 183 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 ERVK-5Q9HDB9 667 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 MTUS1Q9ULD2 1270 aa13.35□□□□□ -0.27
LSP1P3-201ENST00000449530 LINC01553A4QN01 128 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 TOB1P50616 345 aaPredicted RBP13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 GPC3P51654 580 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 POLGP54098 1239 aaPredicted RBP13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 CUL4AQ13619 759 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 NLRP7Q8WX94 980 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 TOP1MTQ969P6 601 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 ADAMTS10Q9H324 1103 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 ST3GAL5Q9UNP4 418 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 PCDHB6Q9Y5E3 794 aa13.34□□□□□ -0.27
LSP1P3-201ENST00000449530 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.28
LSP1P3-201ENST00000449530 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
LSP1P3-201ENST00000449530 EPOPA6NHQ4 379 aa13.33□□□□□ -0.28
LSP1P3-201ENST00000449530 ENPP3O14638 875 aa13.33□□□□□ -0.28
LSP1P3-201ENST00000449530 ZBTB39O15060 712 aa13.33□□□□□ -0.28
LSP1P3-201ENST00000449530 MGEA5O60502 916 aa13.33□□□□□ -0.28
LSP1P3-201ENST00000449530 SLITRK3O94933 977 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms