RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MCAMP43121 646 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 GCLCP48506 637 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SGO2Q562F6 1265 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 OR6B2Q6IFH4 312 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 CMTR1Q8N1G2 835 aaKnown RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 CABS1Q96KC9 395 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SYNGAP1Q96PV0 1343 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 EFCAB8A8MWE9 144 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 F5H6K3 240 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 CD4P01730 458 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 KRT7P08729 469 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 KLRC3Q07444 240 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 CC2D1AQ6P1N0 951 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SMAP1Q8IYB5 467 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 OSBP2Q969R2 916 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 UBE2TQ9NPD8 197 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 NFU1Q9UMS0 254 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 GOLGA8JA6NMD2 632 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 HOXA2O43364 376 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 DDIT3P35638 169 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 RFC5P40937 340 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PEX3P56589 373 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SBK1Q52WX2 424 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 DARS2Q6PI48 645 aaKnown RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 STAMQ92783 540 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 OTUD5Q96G74 571 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 FAM49AQ9H0Q0 323 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 TSPYL2Q9H2G4 693 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 BARHL2Q9NY43 387 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 LRRIQ1Q96JM4 1722 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 TBX3O15119 743 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 KDM1AO60341 852 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 ECEL1O95672 775 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 KRT1P04264 644 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 ZNF157P51786 506 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 DUOXA2Q1HG44 320 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 ITPRIPL1Q6GPH6 555 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PUS7LQ9H0K6 701 aaKnown RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 EIF3BP55884 814 aaKnown RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MESDQ14696 234 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 NFIXQ14938 502 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MMEL1Q495T6 779 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 LRRC8CQ8TDW0 803 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 FAM151AQ8WW52 585 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MYO3AQ8NEV4 1616 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 PPRC1Q5VV67 1664 aaKnown RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MAP2P11137 1827 aaKnown RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 CEP120Q8N960 986 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 TMEM47Q9BQJ4 181 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MMTAG2Q9BU76 263 aaKnown RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 RPAP3Q9H6T3 665 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 SPATA31A5Q5VU36 1347 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 SPATA31A7Q8IWB4 1347 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 HLFQ16534 295 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 NAALADL2Q58DX5 795 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 JPH1Q9HDC5 661 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 FLT1P17948 1338 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 ZBED1O96006 694 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 STAG3L1P0CL83 205 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 YWHAGP61981 247 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 STKLD1Q8NE28 680 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 FOPNLQ96NB1 174 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 DDX56Q9NY93 547 aaKnown RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 ZBBXA8MT70 800 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 ARPP19P56211 112 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 TAF1BQ53T94 588 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 KAZNQ674X7 775 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 ALDH8A1Q9H2A2 487 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MGEA5O60502 916 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 NXNQ6DKJ4 435 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 JADE1Q6IE81 842 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 TEX12Q9BXU0 123 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 TRIM54Q9BYV2 358 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MARK3P27448 753 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 MSH2P43246 934 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 EPHA7Q15375 998 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 RNF10Q8N5U6 811 aaKnown RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 LRGUKQ96M69 825 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
PTPN3-204ENST00000446349 DCP1AQ9NPI6 582 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-204ENST00000446349 CCDC188H7C350 402 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CTNND1O60716 968 aaKnown RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PPFIA2O75334 1257 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 MTA1Q13330 715 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 SLC9A2Q9UBY0 812 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CLIC4Q9Y696 253 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 IQANK1A0A1B0GTG1 560 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 IL18RAPO95256 599 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 SERPINB6P35237 376 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CUL4AQ13619 759 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PDIK1LQ8N165 341 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 ARRDC4Q8NCT1 418 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 IFT43Q96FT9 208 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PANX2Q96RD6 677 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 MRPL40Q9NQ50 206 aaKnown RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PIH1D3Q9NQM4 214 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms