RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 HDDC3Q8N4P3 179 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 POLMQ9NP87 494 aaPredicted RBP7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 CDH7Q9ULB5 785 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 KCNH3Q9ULD8 1083 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 RIPK3Q9Y572 518 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 PLXND1Q9Y4D7 1925 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 ATG2BQ96BY7 2078 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 UBR5O95071 2799 aaPredicted RBP7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 RAD21O60216 631 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 CYP2E1P05181 493 aaPredicted RBP7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 TAF2Q6P1X5 1199 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 CCDC62Q6P9F0 684 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 PPTC7Q8NI37 304 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 CEP76Q8TAP6 659 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 ZNF384Q8TF68 577 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 NUSAP1Q9BXS6 441 aaKnown RBP7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 NUP205Q92621 2012 aa7.68□□□□□ -1.18
BRAFP1-201ENST00000445336 CHRNB1P11230 501 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 GRNP28799 593 aaKnown RBP7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 PHKA1P46020 1223 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 ALDH5A1P51649 535 aaPredicted RBP7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 RSPH3Q86UC2 560 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 SLC39A11Q8N1S5 342 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 SSUH2Q9Y2M2 353 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 HSPA5P11021 654 aaKnown RBP7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 HLA-EP13747 358 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 OXCT1P55809 520 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 CNTN2Q02246 1040 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 FLIIQ13045 1269 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 LRRC24Q50LG9 513 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 TMEM63BQ5T3F8 832 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 ZC3H18Q86VM9 953 aaKnown RBP7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 TMEM117Q9H0C3 514 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 PCDH15Q96QU1 1955 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 ABCA12Q86UK0 2595 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 TRIOO75962 3097 aa7.67□□□□□ -1.18
BRAFP1-201ENST00000445336 PDCD11Q14690 1871 aaKnown RBP7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 ATG13O75143 517 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 DDAH2O95865 285 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 POLR3DP05423 398 aaPredicted RBP7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 USP5P45974 858 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 DDX53Q86TM3 631 aaKnown RBP7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 C8orf33Q9H7E9 229 aaPredicted RBP7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 LMAN1LQ9HAT1 526 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 CYP39A1Q9NYL5 469 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 BPTFQ12830 3046 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 EML5Q05BV3 1969 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 TRABD2BA6NFA1 517 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 ADRA1BP35368 520 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 ARHGAP1Q07960 439 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 CYP4F3Q08477 520 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 TRIP6Q15654 476 aaKnown RBP7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 CCDC102BQ68D86 513 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 TGFBRAP1Q8WUH2 860 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 ADAMTS10Q9H324 1103 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 PLEKHA4Q9H4M7 779 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 AVENQ9NQS1 362 aaPredicted RBP7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 ABCF2Q9UG63 623 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 EBF1Q9UH73 591 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 PHTF1Q9UMS5 762 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 TRIM35Q9UPQ4 493 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 MYO15AQ9UKN7 3530 aa7.66□□□□□ -1.18
BRAFP1-201ENST00000445336 ZNF862O60290 1169 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 OPHN1O60890 802 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 PPFIA4O75335 1185 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 CLCN4P51793 760 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 FOXK1P85037 733 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 TLE3Q04726 772 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 ICA1Q05084 483 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 RASGRF1Q13972 1273 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 ATG9AQ7Z3C6 839 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 SIAH1Q8IUQ4 282 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 LRRC43Q8N309 656 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 OSBP2Q969R2 916 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 PHF20Q9BVI0 1012 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 KANSL2Q9H9L4 492 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 CDH22Q9UJ99 828 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 MEFVO15553 781 aaPredicted RBP7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 ZNF883P0CG24 379 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 HOXB4P17483 251 aaPredicted RBP7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 LPIN1Q14693 890 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 FBXO47Q5MNV8 452 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 PRICKLE2Q7Z3G6 844 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 FAM160B2Q86V87 743 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 LINC01599Q8WXQ3 324 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 PHKBQ93100 1093 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 CUEDC1Q9NWM3 386 aaPredicted RBP7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 CEP126Q9P2H0 1117 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 FRYQ5TBA9 3013 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 KDM3AQ9Y4C1 1321 aa7.65□□□□□ -1.18
BRAFP1-201ENST00000445336 CXCL14O95715 111 aa7.65□□□□□ -1.19
BRAFP1-201ENST00000445336 CCDC192P0DO97 292 aa7.65□□□□□ -1.19
BRAFP1-201ENST00000445336 EPCAMP16422 314 aa7.65□□□□□ -1.19
BRAFP1-201ENST00000445336 NCLP19338 710 aaKnown RBP7.65□□□□□ -1.19
BRAFP1-201ENST00000445336 ACTN2P35609 894 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms