RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 RNF216Q9NWF9 866 aaPredicted RBP21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 SEPT9Q9UHD8 586 aaPredicted RBP21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 TRANK1O15050 2925 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 TTC3P53804 2025 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 A0A0C4DFX4 3053 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 IGKV6-21A0A0C4DH24 114 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 ST18O60284 1047 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 DGKIO75912 1065 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 VTNP04004 478 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 STAG3L1P0CL83 205 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 CLCN3P51790 818 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 SPIRE1Q08AE8 756 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 NFX1Q12986 1120 aaKnown RBP21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 ANO5Q75V66 913 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 NPAS4Q8IUM7 802 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 BANK1Q8NDB2 785 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 PPM1EQ8WY54 764 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 ZNF689Q96CS4 500 aaPredicted RBP21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 C8orf76Q96K31 380 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 JPH2Q9BR39 696 aaPredicted RBP21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 ADAMTS10Q9H324 1103 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 C1orf112Q9NSG2 853 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 ST3GAL5Q9UNP4 418 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 AKT3Q9Y243 479 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 RWDD3Q9Y3V2 267 aa21.14■□□□□ 0.97
ATPAF2-201ENST00000444058 EVPLQ92817 2033 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 MAFO75444 373 aaPredicted RBP21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 NLRP11P59045 1033 aaKnown RBP21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 CCDC85BQ15834 202 aaPredicted RBP21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 TMEM266Q2M3C6 531 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 C4orf19Q8IY42 314 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 LRRC71Q8N4P6 559 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 FIBCD1Q8N539 461 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 FBXO22Q8NEZ5 403 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 FBXO18Q8NFZ0 1043 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 ATXN2LQ8WWM7 1075 aaKnown RBP21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 OSMRQ99650 979 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 C17orf80Q9BSJ5 609 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 FOXP1Q9H334 677 aaPredicted RBP21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 RGS18Q9NS28 235 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 MTUS1Q9ULD2 1270 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 PCDHA12Q9UN75 941 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 PRUNE2Q8WUY3 3088 aa21.13■□□□□ 0.97
ATPAF2-201ENST00000444058 PRRC2BQ5JSZ5 2229 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 ADGRA3Q8IWK6 1321 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 DDX11L8A8MPP1 907 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 EIF4BP23588 611 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 DNM2P50570 870 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 ORC2Q13416 577 aaPredicted RBP21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 CALCRLQ16602 461 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 MTERF2Q49AM1 385 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 EPC2Q52LR7 807 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 TMEM192Q8IY95 271 aa21.12■□□□□ 0.97
ATPAF2-201ENST00000444058 C5orf67F2Z3F1 127 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 NEMFO60524 1076 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 RB1P06400 928 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 SARSP49591 514 aaKnown RBP21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 GPC3P51654 580 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 SLC24A5Q71RS6 500 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 FAM228AQ86W67 206 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 FAM184AQ8NB25 1140 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 GDPD5Q8WTR4 605 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 CLP1Q92989 425 aaKnown RBP21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 MTMR9Q96QG7 549 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 ZSWIM4Q9H7M6 989 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 CYP26B1Q9NR63 512 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 THEGQ9P2T0 379 aa21.11■□□□□ 0.97
ATPAF2-201ENST00000444058 DENND3A2RUS2 1198 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 H3BNC9 293 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 DLL1O00548 723 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 FOSBP53539 338 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 BTG3Q14201 252 aaPredicted RBP21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 OTUD6AQ7L8S5 288 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 CMTR2Q8IYT2 770 aaKnown RBP21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 NEK9Q8TD19 979 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 ADAM2Q99965 735 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 LXNQ9BS40 222 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 TTC12Q9H892 705 aaPredicted RBP21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 LOXHD1Q8IVV2 1947 aa21.1■□□□□ 0.97
ATPAF2-201ENST00000444058 TMEM150BA6NC51 233 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 C9IYK1 514 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 LYPLA2O95372 231 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 LINC00271P0C7V0 271 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 DARSP14868 501 aaKnown RBP21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 FAM189BP81408 668 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 GUCY1B3Q02153 619 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 PTPROQ16827 1216 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 NCAPH2Q6IBW4 605 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 ZNF410Q86VK4 478 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 MICALL1Q8N3F8 863 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 SLC7A3Q8WY07 619 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 PPP1R16BQ96T49 567 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 HSD17B14Q9BPX1 270 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 ELAC1Q9H777 363 aaKnown RBP21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 WRAP73Q9P2S5 460 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 LRFN2Q9ULH4 789 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 PCDHB7Q9Y5E2 793 aa21.09■□□□□ 0.97
ATPAF2-201ENST00000444058 CUL9Q8IWT3 2517 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms