RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 EPHB6O15197 1021 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 PSMC4P43686 418 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 DEUP1Q05D60 604 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 DAB2IPQ5VWQ8 1189 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 RNF43Q68DV7 783 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 ANO7Q6IWH7 933 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 TOM1L2Q6ZVM7 507 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 NSL1Q96IY1 281 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 NR1H4Q96RI1 486 aaPredicted RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 ANKRD2Q9GZV1 360 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 NMRK1Q9NWW6 199 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 ZNF711Q9Y462 761 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 ADGRB3O60242 1522 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 TECP42680 631 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 MCL1Q07820 350 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 CCDC15Q0P6D6 951 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 DHX34Q14147 1143 aaKnown RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 SLC29A2Q14542 456 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 CENPPQ6IPU0 288 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 RBM12BQ8IXT5 1001 aaKnown RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 HELBQ8NG08 1087 aaPredicted RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 GOLPH3Q9H4A6 298 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 IL1RAPL1Q9NZN1 696 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 THEGQ9P2T0 379 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 PTPRMP28827 1452 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 PALLDQ8WX93 1383 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 I3L4J1 428 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 RASGRP4Q8TDF6 673 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 CCDC134Q9H6E4 229 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 MROH1Q8NDA8 1641 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 BCAMP50895 628 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 MKRN4PQ13434 485 aaPredicted RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 UNC13DQ70J99 1090 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 UCMAQ8WVF2 138 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 MTRQ99707 1265 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 PLVAPQ9BX97 442 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 KIAA1683Q9H0B3 1180 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 POTEFA5A3E0 1075 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 POTEIP0CG38 1075 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 POTEJP0CG39 1038 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 ATF2P15336 505 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 NONOQ15233 471 aaKnown RBP eCLIP5.4□□□□□ -1.542e-6■■■□□ 15.3
HERC1-201ENST00000443617 POTEEQ6S8J3 1075 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 HS2ST1Q7LGA3 356 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 UBA5Q9GZZ9 404 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 IQCGQ9H095 443 aaKnown RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 DCLRE1BQ9H816 532 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 NDE1Q9NXR1 346 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 TRMT112Q9UI30 125 aaKnown RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 THRAP3Q9Y2W1 955 aaKnown RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 OVOS2A0A0J9YW53 1432 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 OVOS2Q6IE36 1432 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 BTNL10A8MVZ5 291 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 KCNMA1Q12791 1236 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 AUHQ13825 339 aaKnown RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 TRIP13Q15645 432 aaPredicted RBP5.4□□□□□ -1.54
HERC1-201ENST00000443617 PKN1Q16512 942 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 PARP6Q2NL67 630 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 CEP63Q96MT8 703 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 SMC6Q96SB8 1091 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 SALL4Q9UJQ4 1053 aa5.4□□□□□ -1.54
HERC1-201ENST00000443617 PVALEFA0A1B0GWK0 134 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 KLRC1P26715 233 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 CHRNA3P32297 505 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 SCNN1BP51168 640 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 SRRM1Q8IYB3 904 aaKnown RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 GUF1Q8N442 669 aaKnown RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 CFAP61Q8NHU2 1237 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 SIKE1Q9BRV8 207 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 DRG2P55039 364 aaKnown RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 PTK2Q05397 1052 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 AP1B1Q10567 949 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 PFKFB3Q16875 520 aaPredicted RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 TXNRD1Q16881 649 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 MFSD5Q6N075 450 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 MTDHQ86UE4 582 aaKnown RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 SCFD2Q8WU76 684 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 HPS3Q969F9 1004 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 CHMP2BQ9UQN3 213 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 PGM1P36871 562 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 TBC1D25Q3MII6 688 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 MAP7D3Q8IWC1 876 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 TTC8Q8TAM2 541 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 FAM89AQ96GI7 184 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 A0A087X0T9 212 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 FAM228BP0C875 321 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 CMPK2Q5EBM0 449 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 BTNL9Q6UXG8 535 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 SRBD1Q8N5C6 995 aaKnown RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 LRRC57Q8N9N7 239 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 TBC1D10AQ9BXI6 508 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 METTL14Q9HCE5 456 aaKnown RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 EFCAB6Q5THR3 1501 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 GSG1L2A8MUP6 293 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 GFPT2O94808 682 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 NUDT17P0C025 328 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 MTFR1Q15390 333 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 DTX3LQ8TDB6 740 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 SYT15Q9BQS2 421 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 PIDD1Q9HB75 910 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms