RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 TTI1O43156 1089 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 SIN3BO75182 1162 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 EYA4O95677 639 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NF2P35240 595 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 ETV1P50549 477 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 ZNF600Q6ZNG1 722 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 C4orf50Q6ZRC1 276 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 B4GALNT4Q76KP1 1039 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 CCDC83Q8IWF9 413 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 LRRC71Q8N4P6 559 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 MFSD3Q96ES6 412 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
SYNE2-206ENST00000441438 TUBA1CQ9BQE3 449 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 BRD9Q9H8M2 597 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 KDRP35968 1356 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 SLIT2O94813 1529 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 SCARB2Q14108 478 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 FBXO30Q8TB52 745 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 TRPV6Q9H1D0 765 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 MMRN2Q9H8L6 949 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 COPRSQ9NQ92 184 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 ST7Q9NRC1 585 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.5□□□□□ -0.57
SYNE2-206ENST00000441438 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 SNX8Q9Y5X2 465 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 ZNF804BA4D1E1 1349 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 E2F8A0AVK6 867 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 CCDC69A6NI79 296 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 H3BRJ5 948 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 SERPINC1P01008 464 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 FUT2Q10981 343 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 FAM205BPQ63HN1 556 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 LARP1Q6PKG0 1096 aaKnown RBP11.5□□□□□ -0.57
SYNE2-206ENST00000441438 FAM174AQ8TBP5 190 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
SYNE2-206ENST00000441438 TTC25Q96NG3 672 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-206ENST00000441438 IFT80Q9P2H3 777 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-206ENST00000441438 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
SYNE2-206ENST00000441438 ZSCAN5CA6NGD5 496 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 EOMESO95936 686 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 TPM1P09493 284 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 TFEBP19484 476 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 HNF4AP41235 474 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 MEA1Q16626 185 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 KRTCAP3Q53RY4 240 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 NCCRP1Q6ZVX7 275 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 PLEKHM3Q6ZWE6 761 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 TCP11L2Q8N4U5 519 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 SAMD11Q96NU1 681 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 ANLNQ9NQW6 1124 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 USP6P35125 1406 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 TNKSO95271 1327 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 PLCG2P16885 1265 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 HNF1BP35680 557 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 SOX6P35712 828 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 PRKG1Q13976 671 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 ANKRD35Q8N283 1001 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 LSM14BQ9BX40 385 aaKnown RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 GABRDO14764 452 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 CETN3O15182 167 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 B4GALT4O60513 344 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 PDHA1P08559 390 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 GPR162Q16538 588 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 INTS3Q68E01 1043 aaKnown RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 PLBD2Q8NHP8 589 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 C16orf45Q96MC5 204 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-206ENST00000441438 GJD2Q9UKL4 321 aa11.49□□□□□ -0.57
SYNE2-206ENST00000441438 TTC34A8MYJ7 566 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 OPA1O60313 960 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 TSC22D2O75157 780 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 KCNJ6P48051 423 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 B2MP61769 119 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
SYNE2-206ENST00000441438 GEN1Q17RS7 908 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 EXOC4Q96A65 974 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 CCDC39Q9UFE4 941 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 TRHDEQ9UKU6 1024 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 ANKRD36BQ8N2N9 1353 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms