RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ZGPATQ8N5A5 531 aaKnown RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 CEP120Q8N960 986 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 SHCBP1Q8NEM2 672 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 KLHDC9Q8NEP7 349 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 MAML3Q96JK9 1138 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 NEUROD6Q96NK8 337 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 HHIPQ96QV1 700 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 SEZ6LQ9BYH1 1024 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 BOLA2Q9H3K6 86 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 SPC25Q9HBM1 224 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 TLR9Q9NR96 1032 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 CTNNA3Q9UI47 895 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 FNDC3AQ9Y2H6 1198 aaKnown RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 MYO18BQ8IUG5 2567 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 NBEAQ8NFP9 2946 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 PTPRSQ13332 1948 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 H3BQ06 376 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 PAPLNO95428 1278 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 DLGAP3O95886 979 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 ATP5JP18859 108 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 CST5P28325 142 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 AVPR2P30518 371 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 USP14P54578 494 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 CCL23P55773 120 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 HYAL2Q12891 473 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 ANKRD34AQ69YU3 496 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 PI16Q6UXB8 463 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 CATSPERGQ6ZRH7 1159 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 WFDC3Q8IUB2 231 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 HERC6Q8IVU3 1022 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 GDPD5Q8WTR4 605 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 LPIN2Q92539 896 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 RMDN1Q96DB5 314 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 C12orf42Q96LP6 360 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 HAUS7Q99871 368 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 TINF2Q9BSI4 451 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 NOC4LQ9BVI4 516 aaKnown RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 BACH2Q9BYV9 841 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 ADAM19Q9H013 955 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 IL25Q9H293 177 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 MROH8Q9H579 483 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 ALG13Q9NP73 1137 aaKnown RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 DDX4Q9NQI0 724 aaKnown RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 GNL3LQ9NVN8 582 aaKnown RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 BTBD7Q9P203 1132 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 CNPY2Q9Y2B0 182 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 AKAP2Q9Y2D5 859 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-206ENST00000441089 SALL1Q9NSC2 1324 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 SYNRGQ9UMZ2 1314 aa5.68□□□□□ -1.5
PTPN4-206ENST00000441089 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 NCK2O43639 380 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 DUSP11O75319 330 aaKnown RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 CHGBP05060 677 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 ASGR1P07306 291 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 FCER1AP12319 257 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 MCAMP43121 646 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 TTLL4Q14679 1199 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 TIGD5Q53EQ6 642 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 CCSAPQ6IQ19 270 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 DZIP1Q86YF9 867 aaKnown RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 HELQQ8TDG4 1101 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 GPR152Q8TDT2 470 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 RILPL2Q969X0 211 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 PABPC5Q96DU9 382 aaKnown RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 GPATCH3Q96I76 525 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 TGS1Q96RS0 853 aaKnown RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 FEZ1Q99689 392 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 MOV10L1Q9BXT6 1211 aaKnown RBP5.67□□□□□ -1.5
PTPN4-206ENST00000441089 ANTXR1Q9H6X2 564 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 HOXC10Q9NYD6 342 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 PI4KBQ9UBF8 816 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 SEPT3Q9UH03 358 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 FAM184BQ9ULE4 1060 aa5.67□□□□□ -1.5
PTPN4-206ENST00000441089 IGF2RP11717 2491 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ASPMQ8IZT6 3477 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ZBTB39O15060 712 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 CDC45O75419 566 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 CABYRO75952 493 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 C6orf222P0C671 652 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ZNF865P0CJ78 1059 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ERCC3P19447 782 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 CHMLP26374 656 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 RFC2P35250 354 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 BTDP43251 543 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 KCNJ6P48051 423 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 VCPP55072 806 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ERVK-21P61565 698 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ZXDAP98168 799 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 SIGLEC14Q08ET2 396 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 RRP1BQ14684 758 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 SMAD2Q15796 467 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 PTPROQ16827 1216 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 CCDC158Q5M9N0 1113 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 TTC39AQ5SRH9 613 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 SPTY2D1Q68D10 685 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 PDE12Q6L8Q7 609 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms