RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CLCN3P51790 818 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 AK2P54819 239 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 NAALADL2Q58DX5 795 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 XKR3Q5GH77 459 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 NEK8Q86SG6 692 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 PPP1R16BQ96T49 567 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 TMX1Q9H3N1 280 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 CDHR5Q9HBB8 845 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 RGS18Q9NS28 235 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 SEPT9Q9UHD8 586 aaPredicted RBP21.17■□□□□ 0.98
CCDC78-204ENST00000439619 SIP14410 1827 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 PRRC2BQ5JSZ5 2229 aaKnown RBP21.17■□□□□ 0.98
CCDC78-204ENST00000439619 EDIL3O43854 480 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 ZNF862O60290 1169 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 ZSCAN20P17040 1043 aaPredicted RBP21.16■□□□□ 0.98
CCDC78-204ENST00000439619 NLRP11P59045 1033 aaKnown RBP21.16■□□□□ 0.98
CCDC78-204ENST00000439619 PPP4R3AQ6IN85 833 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 TMEM40Q8WWA1 233 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 P2RX5Q93086 422 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 PPP2R3CQ969Q6 453 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 FAM20AQ96MK3 541 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 MBOAT7Q96N66 472 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 AAASQ9NRG9 546 aa21.16■□□□□ 0.98
CCDC78-204ENST00000439619 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.15■□□□□ 0.98
CCDC78-204ENST00000439619 GPR32O75388 356 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 KCNA5P22460 613 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 NPY5RQ15761 445 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 PUS10Q3MIT2 529 aaKnown RBP21.15■□□□□ 0.98
CCDC78-204ENST00000439619 PAN2Q504Q3 1202 aaKnown RBP21.15■□□□□ 0.98
CCDC78-204ENST00000439619 EP400NLQ6ZTU2 488 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 LRRC71Q8N4P6 559 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 ETNPPLQ8TBG4 499 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 GJA10Q969M2 543 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 JPH2Q9BR39 696 aaPredicted RBP21.15■□□□□ 0.98
CCDC78-204ENST00000439619 ATP6V0A4Q9HBG4 840 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 FAM50BQ9Y247 325 aa21.15■□□□□ 0.98
CCDC78-204ENST00000439619 MRPL42Q9Y6G3 142 aaKnown RBP21.15■□□□□ 0.98
CCDC78-204ENST00000439619 HOXA2O43364 376 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 CCNT1O60563 726 aaKnown RBP21.14■□□□□ 0.97
CCDC78-204ENST00000439619 EIF4BP23588 611 aaKnown RBP21.14■□□□□ 0.97
CCDC78-204ENST00000439619 NEK4P51957 841 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 PSMC5P62195 406 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 TRIM29Q14134 588 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 UGCGQ16739 394 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 LEXMQ3ZCV2 418 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 TCEAL5Q5H9L2 206 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 SPOUT1Q5T280 376 aaKnown RBP21.14■□□□□ 0.97
CCDC78-204ENST00000439619 PIK3AP1Q6ZUJ8 805 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 FAM228AQ86W67 206 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 CRIPAKQ8N1N5 446 aa21.14■□□□□ 0.97
CCDC78-204ENST00000439619 NIFKQ9BYG3 293 aaKnown RBP21.14■□□□□ 0.97
CCDC78-204ENST00000439619 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 TBX3O15119 743 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 BAG4O95429 457 aaKnown RBP21.13■□□□□ 0.97
CCDC78-204ENST00000439619 KRT2P35908 639 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 MTERF2Q49AM1 385 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 NLRP7Q8WX94 980 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 PABPC5Q96DU9 382 aaKnown RBP21.13■□□□□ 0.97
CCDC78-204ENST00000439619 ELAC1Q9H777 363 aaKnown RBP21.13■□□□□ 0.97
CCDC78-204ENST00000439619 TMEM161AQ9NX61 479 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 PCDHB12Q9Y5F1 795 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 TTC28Q96AY4 2481 aa21.13■□□□□ 0.97
CCDC78-204ENST00000439619 GRM6O15303 877 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 MMP1P03956 469 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 LINC00271P0C7V0 271 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 B3GNT9Q6UX72 402 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 LINC01465Q8N7H1 131 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 GTF3C6Q969F1 213 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 NECAB3Q96P71 396 aaPredicted RBP21.12■□□□□ 0.97
CCDC78-204ENST00000439619 GCOM2Q9BZD3 368 aaPredicted RBP21.12■□□□□ 0.97
CCDC78-204ENST00000439619 ADAMTS10Q9H324 1103 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 PLAGL2Q9UPG8 496 aa21.12■□□□□ 0.97
CCDC78-204ENST00000439619 TBKBP1A7MCY6 615 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 C9IYK1 514 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 SLC37A4O43826 429 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 MGEA5O60502 916 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 QARSP47897 775 aaKnown RBP21.11■□□□□ 0.97
CCDC78-204ENST00000439619 GPC3P51654 580 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 PPP2R5CQ13362 524 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 TARBP2Q15633 366 aaKnown RBP21.11■□□□□ 0.97
CCDC78-204ENST00000439619 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 SLFN12Q8IYM2 578 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 ABI1Q8IZP0 508 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 NECAB1Q8N987 351 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 INO80BQ9C086 356 aaPredicted RBP21.11■□□□□ 0.97
CCDC78-204ENST00000439619 ALG13Q9NP73 1137 aaKnown RBP21.11■□□□□ 0.97
CCDC78-204ENST00000439619 KCNMB3Q9NPA1 279 aa21.11■□□□□ 0.97
CCDC78-204ENST00000439619 SPTBN5Q9NRC6 3674 aaKnown RBP21.11■□□□□ 0.97
CCDC78-204ENST00000439619 CTDNEP1O95476 244 aa21.1■□□□□ 0.97
CCDC78-204ENST00000439619 P4HBP07237 508 aaKnown RBP21.1■□□□□ 0.97
CCDC78-204ENST00000439619 DARSP14868 501 aaKnown RBP21.1■□□□□ 0.97
CCDC78-204ENST00000439619 ME3Q16798 604 aa21.1■□□□□ 0.97
CCDC78-204ENST00000439619 SLC7A3Q8WY07 619 aa21.1■□□□□ 0.97
CCDC78-204ENST00000439619 CLDND1Q9NY35 253 aa21.1■□□□□ 0.97
CCDC78-204ENST00000439619 DACT1Q9NYF0 836 aa21.1■□□□□ 0.97
CCDC78-204ENST00000439619 PPME1Q9Y570 386 aa21.1■□□□□ 0.97
CCDC78-204ENST00000439619 SFPQP23246 707 aaKnown RBP eCLIP21.09■□□□□ 0.97
CCDC78-204ENST00000439619 FAM189BP81408 668 aa21.09■□□□□ 0.97
CCDC78-204ENST00000439619 PTCRAQ6ISU1 281 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms