RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF658Q5TYW1 1059 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 LRCH2Q5VUJ6 765 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ARHGEF16Q5VV41 709 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 SARM1Q6SZW1 724 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 NSMFQ6X4W1 530 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 C11orf57Q6ZUT1 292 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 LUZP1Q86V48 1076 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 RIOX2Q8IUF8 465 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 NPAS3Q8IXF0 933 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 REPS2Q8NFH8 660 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 C1orf216Q8TAB5 229 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ETNPPLQ8TBG4 499 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 NEK9Q8TD19 979 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 SNX29Q8TEQ0 813 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 TBC1D5Q92609 795 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 LARP4BQ92615 738 aaKnown RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 RAD54LQ92698 747 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 VTI1AQ96AJ9 217 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 LENG9Q96B70 501 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ATG4CQ96DT6 458 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 TRIM44Q96DX7 344 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 CDHR1Q96JP9 859 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 CLMNQ96JQ2 1002 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 IWS1Q96ST2 819 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 RMDN3Q96TC7 470 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 P2RX7Q99572 595 aaKnown RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 MXRA8Q9BRK3 442 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZNF577Q9BSK1 485 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 MMTAG2Q9BU76 263 aaKnown RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 C2orf49Q9BVC5 232 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 TEKT3Q9BXF9 490 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 PHACTR1Q9C0D0 580 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 SAP130Q9H0E3 1048 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ACAD9Q9H845 621 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 RRAGCQ9HB90 399 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 TUFT1Q9NNX1 390 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 HOMER2Q9NSB8 354 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 TBC1D22BQ9NU19 505 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ADD3Q9UEY8 706 aaKnown RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 TCEAL9Q9UHQ7 104 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 MAN1B1Q9UKM7 699 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZNF214Q9UL59 606 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 FZD1Q9UP38 647 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 AGTPBP1Q9UPW5 1226 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 DNM3Q9UQ16 869 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 SLC45A1Q9Y2W3 748 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 FRMPD4Q14CM0 1322 aa4.43□□□□□ -1.7
HMGB1P37-201ENST00000439613 KIAA1217Q5T5P2 1943 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 LOC102724159A0A0B4J2E5 919 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 A0A0G2JMZ2 1700 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PP2D1A8MPX8 630 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 IPO5O00410 1097 aaKnown RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 TERTO14746 1132 aaKnown RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PSMA7O14818 248 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 FOXN1O15353 648 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 CBFA2T2O43439 604 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PSMD10O75832 226 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 RHOBTB3O94955 611 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 KIF20AO95235 890 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 ABL1P00519 1130 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PTMAP06454 111 aaKnown RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZBTB48P10074 688 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 CDC25BP30305 580 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 SFNP31947 248 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 VEGFBP49765 207 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 HERVK_113P62684 666 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 CCNA1P78396 465 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 SPIRE1Q08AE8 756 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 GRB10Q13322 594 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PPP2R5CQ13362 524 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 DGKZQ13574 1117 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 CUL4BQ13620 913 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 BAATQ14032 418 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PWP2Q15269 919 aaKnown RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 EPHA7Q15375 998 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 GNPTABQ3T906 1256 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 NAALADL2Q58DX5 795 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 MUM1L1Q5H9M0 696 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 TREML2Q5T2D2 321 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 SPATA1Q5VX52 437 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 MAP1SQ66K74 1059 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 NCAPH2Q6IBW4 605 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 DLK2Q6UY11 383 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 RIPOR1Q6ZS17 1223 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 OTOP1Q7RTM1 612 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 NLRX1Q86UT6 975 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 VSIG10LQ86VR7 867 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 DHX40Q8IX18 779 aaKnown RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 CCDC65Q8IXS2 484 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 GRAMD1CQ8IYS0 662 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 ANKRD35Q8N283 1001 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 PGBD3Q8N328 593 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 AOPEPQ8N6M6 819 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 GIMAP8Q8ND71 665 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 SHCBP1Q8NEM2 672 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 ANKRD20A12PQ8NF67 263 aa4.42□□□□□ -1.7
HMGB1P37-201ENST00000439613 DNERQ8NFT8 737 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms