RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 GRID2IPA4D2P6 1211 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 HNRNPCL1O60812 293 aaKnown RBP16.08■□□□□ 0.16
TSC2-206ENST00000439117 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
TSC2-206ENST00000439117 PPM1FP49593 454 aaPredicted RBP16.08■□□□□ 0.16
TSC2-206ENST00000439117 PTK2Q05397 1052 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 CRYMQ14894 314 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 USP6NLQ92738 828 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 IQANK1A0A1B0GTG1 560 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 MDH1P40925 334 aaKnown RBP16.08■□□□□ 0.16
TSC2-206ENST00000439117 KAZNQ674X7 775 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 APLFQ8IW19 511 aaPredicted RBP16.08■□□□□ 0.16
TSC2-206ENST00000439117 CCDC117Q8IWD4 279 aaPredicted RBP16.08■□□□□ 0.16
TSC2-206ENST00000439117 ZNF341Q9BYN7 854 aa16.08■□□□□ 0.16
TSC2-206ENST00000439117 UTYO14607 1347 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 NEDD4P46934 1319 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 SRGAP2O75044 1071 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 ACTN1P12814 892 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 MAPK4P31152 587 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 PDZD4Q76G19 769 aaPredicted RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 LCA5Q86VQ0 697 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 FAM133AQ8N9E0 248 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 NSMCE1Q8WV22 266 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 MAML1Q92585 1016 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 ZNF653Q96CK0 615 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 TAF1DQ9H5J8 278 aaPredicted RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 HAUS2Q9NVX0 235 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 COBLO75128 1261 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 MFAP3P55082 362 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 MRPS35P82673 323 aaKnown RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 C1orf146Q5VVC0 180 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 RINT1Q6NUQ1 792 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 ALKBH5Q6P6C2 394 aaKnown RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 CRLF3Q8IUI8 442 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 GJA10Q969M2 543 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 PPARGC1AQ9UBK2 798 aaKnown RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 A0A0G2JND7 137 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 TTI1O43156 1089 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 PYGBP11216 843 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 HDLBPQ00341 1268 aaKnown RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 CCT8L2Q96SF2 557 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 KCNF1Q9H3M0 494 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 CEP170BQ9Y4F5 1589 aaPredicted RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 DIAPH2O60879 1101 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 ACSL3O95573 720 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 HNRNPH1P31943 449 aaKnown RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 SCARF1Q14162 830 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 FAM47EQ6ZV65 393 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 SESTD1Q86VW0 696 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 ZNF473Q8WTR7 871 aaKnown RBP16.07■□□□□ 0.16
TSC2-206ENST00000439117 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
TSC2-206ENST00000439117 FGGP02679 453 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 CCND1P24385 295 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 UBE2SQ16763 222 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 NACC1Q96RE7 527 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 CENPUQ71F23 418 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 GSPT2Q8IYD1 628 aaKnown RBP16.06■□□□□ 0.16
TSC2-206ENST00000439117 IL17RAQ96F46 866 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 PAGE5Q96GU1 130 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 PCDHB6Q9Y5E3 794 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 LGALS16A8MUM7 142 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 MIF4GDA9UHW6 222 aaKnown RBP16.06■□□□□ 0.16
TSC2-206ENST00000439117 H7C0C1 242 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 ATP5OP48047 213 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 SLC7A3Q8WY07 619 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 CRAMP1Q96RY5 1269 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 GNGT2O14610 69 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 GAP43P17677 238 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 MYL7Q01449 175 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 LRRC63Q05C16 580 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 PSMD2Q13200 908 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 TBC1D10BQ4KMP7 808 aaPredicted RBP16.06■□□□□ 0.16
TSC2-206ENST00000439117 RHOT2Q8IXI1 618 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 CCDC127Q96BQ5 260 aa16.06■□□□□ 0.16
TSC2-206ENST00000439117 ZNF277Q9NRM2 450 aaPredicted RBP16.06■□□□□ 0.16
TSC2-206ENST00000439117 WDR91A4D1P6 747 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 RASA4BC9J798 803 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 RASA4O43374 803 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 CAV1Q03135 178 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 SLC44A5Q8NCS7 719 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 SEPT9Q9UHD8 586 aaPredicted RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 PPP1R12AO14974 1030 aaPredicted RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 TNNC2P02585 160 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 KRT10P13645 584 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 RCAN1P53805 252 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 GUCY1A3Q02108 690 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 TEDDM1Q5T9Z0 273 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms