RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 RSPH10B2B2RC85 870 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 PPP6R2O75170 966 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 RSPH10BP0C881 870 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
TARDBP-203ENST00000439080 TMOD1P28289 359 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 RFC2P35250 354 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 RFC5P40937 340 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 UBA7P41226 1012 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 KRT85P78386 507 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 MGAT3Q09327 533 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 MBTPS1Q14703 1052 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 EMC2Q15006 297 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 SPECC1Q5M775 1068 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 HYIQ5T013 277 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 KIAA0319LQ8IZA0 1049 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 KCNG4Q8TDN1 519 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 CDK5RAP3Q96JB5 506 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 PNMA5Q96PV4 448 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 MAP7D2Q96T17 732 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 DHX33Q9H6R0 707 aaKnown RBP18.86■□□□□ 0.61
TARDBP-203ENST00000439080 SUGCTQ9HAC7 445 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 DBR1Q9UK59 544 aaKnown RBP18.86■□□□□ 0.61
TARDBP-203ENST00000439080 AKT3Q9Y243 479 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 CDY2AQ9Y6F7 541 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 MYH11P35749 1972 aa18.86■□□□□ 0.61
TARDBP-203ENST00000439080 LAMA3Q16787 3333 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 M0QZ92 97 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 VTNP04004 478 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
TARDBP-203ENST00000439080 EPHB4P54760 987 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 GRB10Q13322 594 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 DRP2Q13474 957 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 FAM26DQ5JW98 314 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 RASSF8Q8NHQ8 419 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
TARDBP-203ENST00000439080 PPP1R16BQ96T49 567 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-203ENST00000439080 UBE2OQ9C0C9 1292 aaKnown RBP18.85■□□□□ 0.61
TARDBP-203ENST00000439080 NT5C3AQ9H0P0 336 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 IL23AQ9NPF7 189 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 CIZ1Q9ULV3 898 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-203ENST00000439080 TRPV2Q9Y5S1 764 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 PTPRSQ13332 1948 aa18.85■□□□□ 0.61
TARDBP-203ENST00000439080 RBAK-RBAKDNI3L0D1 243 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 SLC26A4O43511 780 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 USO1O60763 962 aaKnown RBP18.84■□□□□ 0.61
TARDBP-203ENST00000439080 NBNO60934 754 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 DGAT1O75907 488 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 PARNO95453 639 aaKnown RBP18.84■□□□□ 0.61
TARDBP-203ENST00000439080 CHRNA1P02708 482 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 ACRP10323 421 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
TARDBP-203ENST00000439080 TMEM119Q4V9L6 283 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 IER5Q5VY09 327 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 EXOC8Q8IYI6 725 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 NME8Q8N427 588 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 VWCEQ96DN2 955 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 CALML4Q96GE6 196 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 EPSTI1Q96J88 318 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 MTRQ99707 1265 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 BHMT2Q9H2M3 363 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 ATP6V0A4Q9HBG4 840 aa18.84■□□□□ 0.61
TARDBP-203ENST00000439080 ARHGEF35A5YM69 484 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 E9PMD0 336 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 GAS2O43903 313 aaKnown RBP18.83■□□□□ 0.61
TARDBP-203ENST00000439080 PFKMP08237 780 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 TXLNAP40222 546 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 GPNMBQ14956 572 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 KARSQ15046 597 aaKnown RBP18.83■□□□□ 0.61
TARDBP-203ENST00000439080 PSRC1Q6PGN9 363 aaPredicted RBP18.83■□□□□ 0.61
TARDBP-203ENST00000439080 USP49Q70CQ1 688 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 KCNK18Q7Z418 384 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 PLIN2Q99541 437 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 CCSER1Q9C0I3 900 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 PRO3102Q9H379 93 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 XPNPEP1Q9NQW7 623 aa18.83■□□□□ 0.61
TARDBP-203ENST00000439080 EYA4O95677 639 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 CXCL10P02778 98 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 PLCG1P19174 1290 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 BMP8BP34820 402 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 ME1P48163 572 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 DNM2P50570 870 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 KIZQ2M2Z5 673 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 RPUSD2Q8IZ73 545 aaKnown RBP18.82■□□□□ 0.6
TARDBP-203ENST00000439080 TMEM143Q96AN5 459 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 CELF4Q9BZC1 486 aaKnown RBP18.82■□□□□ 0.6
TARDBP-203ENST00000439080 DNM3Q9UQ16 869 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 GINS2Q9Y248 185 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 GBF1Q92538 1859 aa18.82■□□□□ 0.6
TARDBP-203ENST00000439080 CUTAO60888 179 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 GHRP10912 638 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 GPC3P51654 580 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 PADI6Q6TGC4 694 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 C16orf59Q7L2K0 433 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 KCTD17Q8N5Z5 321 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 LRRC15Q8TF66 581 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 SPATA32Q96LK8 384 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 OSMRQ99650 979 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms