RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TREML2Q5T2D2 321 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 PAPD7Q5XG87 772 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 PCNX4Q63HM2 1172 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 PDXDC1Q6P996 788 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 SAMD3Q8N6K7 520 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 ANKRD13CQ8N6S4 541 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 POLR3CQ9BUI4 534 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 PKD2L1Q9P0L9 805 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 FRMPD4Q14CM0 1322 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 NOL4O94818 638 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 MOCS3O95396 460 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 NR2F2P24468 414 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 POLR2FP61218 127 aaKnown RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 BAATQ14032 418 aaPredicted RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 EAPPQ56P03 285 aaPredicted RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 PACS2Q86VP3 889 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 CEP63Q96MT8 703 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 RMDN3Q96TC7 470 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 WDR11Q9BZH6 1224 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 TSGA10Q9BZW7 698 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 FAM204AQ9H8W3 233 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 ZMYND10O75800 440 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 NF2P35240 595 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 ARID5AQ03989 594 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 CTTNQ14247 550 aaKnown RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 PLS1Q14651 629 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 PGM5Q15124 567 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 CAGE1Q8TC20 777 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 ZC3H15Q8WU90 426 aaKnown RBP15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 TEX13BQ9BXU2 312 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 UNC45AQ9H3U1 944 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 KCNH7Q9NS40 1196 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 HOXC10Q9NYD6 342 aa15.22■□□□□ 0.03
PTCHD3-201ENST00000438700 ERLIN1O75477 346 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 MYBP10242 640 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 BCRP11274 1271 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 HOXA7P31268 230 aaPredicted RBP15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 TKFCQ3LXA3 575 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 PIGOQ8TEQ8 1089 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 PSMB7Q99436 277 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 HSD17B14Q9BPX1 270 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 TEKT3Q9BXF9 490 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 PXMP2Q9NR77 195 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 UBIAD1Q9Y5Z9 338 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 IRF6O14896 467 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 MYCLP12524 364 aaPredicted RBP15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 HGSNATQ68CP4 663 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 NIPA1Q7RTP0 329 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 CEP72Q9P209 647 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 LOC285556D6RIA3 1793 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 SCN4AP35499 1836 aa15.21■□□□□ 0.03
PTCHD3-201ENST00000438700 PDE2AO00408 941 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 ATP2A1O14983 1001 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 TLR2O60603 784 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 GNA14O95837 355 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 TPH2Q8IWU9 490 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 TRIM58Q8NG06 486 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 RIT2Q99578 217 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 TAF1DQ9H5J8 278 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 SALL4Q9UJQ4 1053 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 ZBTB39O15060 712 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 CETN3O15182 167 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 EIF3JO75822 258 aaKnown RBP15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 SLITRK3O94933 977 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 HOXD13P35453 343 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 MAGEA1P43355 309 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 TUBB4BP68371 445 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 KCNA1Q09470 495 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 MTMR1Q13613 665 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 GADL1Q6ZQY3 521 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 ZC3H4Q9UPT8 1303 aaKnown RBP15.2■□□□□ 0.02
PTCHD3-201ENST00000438700 ANO9A1A5B4 782 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 BUB1O43683 1085 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 TACC1O75410 805 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 GCNT3O95395 438 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 LCA5LO95447 670 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 SYF2O95926 243 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms