RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 LRRC43Q8N309 656 aa16.04■□□□□ 0.16
LINC01088-201ENST00000437737 FLCNQ8NFG4 579 aa16.04■□□□□ 0.16
LINC01088-201ENST00000437737 ELAC1Q9H777 363 aaKnown RBP16.04■□□□□ 0.16
LINC01088-201ENST00000437737 KCNH7Q9NS40 1196 aa16.04■□□□□ 0.16
LINC01088-201ENST00000437737 NFASCO94856 1347 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 HOXA2O43364 376 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 DDAH1O94760 285 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 SMARCA1P28370 1054 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 SLC26A2P50443 739 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 CLCN5P51795 746 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 RARS2Q5T160 578 aaKnown RBP16.03■□□□□ 0.16
LINC01088-201ENST00000437737 ZNF654Q8IZM8 581 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 MAP3K14Q99558 947 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 OSMRQ99650 979 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 LZTS2Q9BRK4 669 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 SPG21Q9NZD8 308 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
LINC01088-201ENST00000437737 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
LINC01088-201ENST00000437737 C2orf71A6NGG8 1288 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 E7EWF7 191 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 BACH1O14867 736 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 HBP1O60381 514 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 GSPT1P15170 499 aaKnown RBP16.02■□□□□ 0.16
LINC01088-201ENST00000437737 GNAQP50148 359 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 KIZQ2M2Z5 673 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 LRRC55Q6ZSA7 311 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 FAM228AQ86W67 206 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 KIAA0319LQ8IZA0 1049 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 CASD1Q96PB1 797 aa16.02■□□□□ 0.16
LINC01088-201ENST00000437737 COL1A2P08123 1366 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 DDX39AO00148 427 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 FAM189BP81408 668 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 BMS1Q14692 1282 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 SRBD1Q8N5C6 995 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 MRPL43Q8N983 215 aaKnown RBP16.01■□□□□ 0.15
LINC01088-201ENST00000437737 RNF169Q8NCN4 708 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 CYP2W1Q8TAV3 490 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 IGDCC4Q8TDY8 1250 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 DMDP11532 3685 aa16.01■□□□□ 0.15
LINC01088-201ENST00000437737 MYH9P35579 1960 aaKnown RBP16■□□□□ 0.15
LINC01088-201ENST00000437737 DENND4AQ7Z401 1863 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 hCG_1642624A0A1W2PR95 340 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 CDC45O75419 566 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 ARP10275 920 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 ZSCAN20P17040 1043 aaPredicted RBP16■□□□□ 0.15
LINC01088-201ENST00000437737 ANTXR2P58335 489 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 ITGB3BPQ13352 177 aaPredicted RBP16■□□□□ 0.15
LINC01088-201ENST00000437737 ZNF484Q5JVG2 852 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 KIAA1841Q6NSI8 718 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 C12orf76Q8N812 135 aaPredicted RBP16■□□□□ 0.15
LINC01088-201ENST00000437737 KCNG4Q8TDN1 519 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 DZANK1Q9NVP4 752 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
LINC01088-201ENST00000437737 ATG7O95352 703 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 VTNP04004 478 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 RXRAP19793 462 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 AOC1P19801 751 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 METAP2P50579 478 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC01088-201ENST00000437737 PTH1RQ03431 593 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 DSC3Q14574 896 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 ANGPT1Q15389 498 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 PDXDC2PQ6P474 469 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 HEATR3Q7Z4Q2 680 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 CKAP2LQ8IYA6 745 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 CCDC105Q8IYK2 499 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 METTL13Q8N6R0 699 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
LINC01088-201ENST00000437737 ZNF302Q9NR11 478 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 RNF19AQ9NV58 838 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 USTQ9Y2C2 406 aa15.99■□□□□ 0.15
LINC01088-201ENST00000437737 GVINP1Q7Z2Y8 2422 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 CACNA1AO00555 2505 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 IGKV6D-21A0A0A0MT36 114 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.98■□□□□ 0.15
LINC01088-201ENST00000437737 CCDC69A6NI79 296 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 PI15O43692 258 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 CXCL14O95715 111 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 EOMESO95936 686 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 KANK3Q6NY19 840 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 CCDC60Q8IWA6 550 aaPredicted RBP15.98■□□□□ 0.15
LINC01088-201ENST00000437737 MB21D2Q8IYB1 491 aaPredicted RBP15.98■□□□□ 0.15
LINC01088-201ENST00000437737 CCDC82Q8N4S0 544 aa15.98■□□□□ 0.15
LINC01088-201ENST00000437737 ACSF2Q96CM8 615 aaPredicted RBP15.98■□□□□ 0.15
LINC01088-201ENST00000437737 TMEM169Q96HH4 297 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms