RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 PPP2R3BQ9Y5P8 575 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 VSTM5A8MXK1 200 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 FZD9O00144 591 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 NRP2O60462 931 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
USP54-206ENST00000433394 GLI1P08151 1106 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 NCAM1P13591 858 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 MBNL2Q5VZF2 373 aaKnown RBP7.67□□□□□ -1.18
USP54-206ENST00000433394 FAM180AQ6UWF9 173 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 MPZL3Q6UWV2 235 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 NFXL1Q6ZNB6 911 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 DGKHQ86XP1 1220 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 PAWRQ96IZ0 340 aaKnown RBP7.67□□□□□ -1.18
USP54-206ENST00000433394 LRGUKQ96M69 825 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 WRNIP1Q96S55 665 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 TMEM209Q96SK2 561 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 GALNT8Q9NY28 637 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 KLHL14Q9P2G3 628 aa7.67□□□□□ -1.18
USP54-206ENST00000433394 PRSS38A1L453 326 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 LRG1P02750 347 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 CYP2C8P10632 490 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 OSMP13725 252 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 PFKLP17858 780 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 APEX1P27695 318 aaKnown RBP7.66□□□□□ -1.18
USP54-206ENST00000433394 STAT5AP42229 794 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 ADKP55263 362 aaKnown RBP7.66□□□□□ -1.18
USP54-206ENST00000433394 NFATC3Q12968 1075 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 BRD3Q15059 726 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 ANO4Q32M45 955 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 KSR2Q6VAB6 950 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 ZSWIM9Q86XI8 627 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 OR14C36Q8NHC7 312 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 JADE3Q92613 823 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 FOXRED1Q96CU9 486 aaPredicted RBP7.66□□□□□ -1.18
USP54-206ENST00000433394 RNF38Q9H0F5 515 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 SLC39A2Q9NP94 309 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 SIRT5Q9NXA8 310 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
USP54-206ENST00000433394 ZNF839A8K0R7 811 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA12O60330 932 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 CYP7B1O75881 506 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 LPLP06858 475 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 ECE1P42892 770 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 MTNR1BP49286 362 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 GP2P55259 537 aaKnown RBP7.65□□□□□ -1.18
USP54-206ENST00000433394 LGALS4P56470 323 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 NRG3P56975 720 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 YBX1P67809 324 aaKnown RBP7.65□□□□□ -1.18
USP54-206ENST00000433394 ZNF200P98182 395 aaPredicted RBP7.65□□□□□ -1.18
USP54-206ENST00000433394 PFKPQ01813 784 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 ODF1Q14990 250 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 TMEM132EQ6IEE7 984 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 MYPNQ86TC9 1320 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 ABI1Q8IZP0 508 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 CPA5Q8WXQ8 436 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 HIST1H2AHQ96KK5 128 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 HIST1H2AJQ99878 128 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 BTBD2Q9BX70 525 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 ACE2Q9BYF1 805 aaPredicted RBP7.65□□□□□ -1.18
USP54-206ENST00000433394 KCTD10Q9H3F6 313 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 DLL4Q9NR61 685 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 OBP2AQ9NY56 170 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 ARHGAP20Q9P2F6 1191 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA9Q9Y5G4 932 aaKnown RBP7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA8Q9Y5G5 932 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA7Q9Y5G6 932 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA6Q9Y5G7 932 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA3Q9Y5H0 932 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 PCDHGA2Q9Y5H1 932 aa7.65□□□□□ -1.18
USP54-206ENST00000433394 NDUFS2O75306 463 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 PCDH8O95206 1070 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 NBPF7P0C2Y1 421 aaPredicted RBP7.64□□□□□ -1.19
USP54-206ENST00000433394 ITGB7P26010 798 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 MC4RP32245 332 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 GPR15P49685 360 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 RGS3P49796 1198 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 KIF23Q02241 960 aaPredicted RBP7.64□□□□□ -1.19
USP54-206ENST00000433394 PPARAQ07869 468 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 CACNB2Q08289 660 aaPredicted RBP7.64□□□□□ -1.19
USP54-206ENST00000433394 MOGSQ13724 837 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 MUM1Q2TAK8 710 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 UAP1L1Q3KQV9 507 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 CCDC178Q5BJE1 867 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 PITRM1Q5JRX3 1037 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 RRP12Q5JTH9 1297 aaKnown RBP7.64□□□□□ -1.19
USP54-206ENST00000433394 CDYL2Q8N8U2 506 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 FATE1Q969F0 183 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 TTC17Q96AE7 1141 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 CLIC6Q96NY7 704 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 OR10A5Q9H207 317 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 SEMA4AQ9H3S1 761 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 IFT122Q9HBG6 1241 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 ZNF277Q9NRM2 450 aaPredicted RBP7.64□□□□□ -1.19
USP54-206ENST00000433394 C1orf112Q9NSG2 853 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 DPP7Q9UHL4 492 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 USP18Q9UMW8 372 aa7.64□□□□□ -1.19
USP54-206ENST00000433394 ELL2O00472 640 aaPredicted RBP7.63□□□□□ -1.19
USP54-206ENST00000433394 PEX14O75381 377 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms