RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RFC5P40937 340 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
CSTF3-202ENST00000431742 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 LRRC15Q8TF66 581 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 MICAL3Q7RTP6 2002 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 E9PMD0 336 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 H0YGN5 161 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 EYA4O95677 639 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 SELPP16109 830 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 PLCG1P19174 1290 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 THPOP40225 353 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 ME1P48163 572 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 CLCN3P51790 818 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 MGAT3Q09327 533 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 EMC2Q15006 297 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 KARSQ15046 597 aaKnown RBP16.04■□□□□ 0.16
CSTF3-202ENST00000431742 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 ZNF618Q5T7W0 954 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 EFCAB12Q6NXP0 572 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 SHC4Q6S5L8 630 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 LRRC8DQ7L1W4 858 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 EXOC8Q8IYI6 725 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 RETREG2Q8NC44 543 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 DNAJB3Q8WWF6 145 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 CALML4Q96GE6 196 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 JPH2Q9BR39 696 aaPredicted RBP16.04■□□□□ 0.16
CSTF3-202ENST00000431742 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
CSTF3-202ENST00000431742 XPNPEP1Q9NQW7 623 aa16.04■□□□□ 0.16
CSTF3-202ENST00000431742 GAS2O43903 313 aaKnown RBP16.03■□□□□ 0.16
CSTF3-202ENST00000431742 DGAT1O75907 488 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 IQCF3P0C7M6 154 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 POLGP54098 1239 aaPredicted RBP16.03■□□□□ 0.16
CSTF3-202ENST00000431742 MRPS6P82932 125 aaKnown RBP16.03■□□□□ 0.16
CSTF3-202ENST00000431742 DRP2Q13474 957 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 MBTPS1Q14703 1052 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
CSTF3-202ENST00000431742 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 RSPH3Q86UC2 560 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 NME8Q8N427 588 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 METTL13Q8N6R0 699 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 SLC7A3Q8WY07 619 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 VWCEQ96DN2 955 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
CSTF3-202ENST00000431742 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 PTPRSQ13332 1948 aa16.03■□□□□ 0.16
CSTF3-202ENST00000431742 A0A087X0B3 334 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 CHRNA1P02708 482 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 TXLNAP40222 546 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 GPNMBQ14956 572 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 NAALADL2Q58DX5 795 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 ADALQ6DHV7 355 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 PADI6Q6TGC4 694 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 BADQ92934 168 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 PLIN2Q99541 437 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 GDPD2Q9HCC8 539 aa16.02■□□□□ 0.16
CSTF3-202ENST00000431742 RSPH10B2B2RC85 870 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 USO1O60763 962 aaKnown RBP16.01■□□□□ 0.15
CSTF3-202ENST00000431742 PARNO95453 639 aaKnown RBP16.01■□□□□ 0.15
CSTF3-202ENST00000431742 CTSHP09668 335 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 RSPH10BP0C881 870 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 TMOD1P28289 359 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 RFC2P35250 354 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
CSTF3-202ENST00000431742 SLC12A3P55017 1021 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 CCL23P55773 120 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 SCLYQ96I15 445 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 MAP7D2Q96T17 732 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 MTRQ99707 1265 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 GDF15Q99988 308 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 SUGCTQ9HAC7 445 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
CSTF3-202ENST00000431742 STK17AQ9UEE5 414 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 TRPV2Q9Y5S1 764 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 CDY2AQ9Y6F7 541 aa16.01■□□□□ 0.15
CSTF3-202ENST00000431742 FAM237AA0A1B0GTK4 181 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 GPR32O75388 356 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 CXCL10P02778 98 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 VTNP04004 478 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 PLA2G4BP0C869 781 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 CSF2RAP15509 400 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 CYP11B2P19099 503 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 FPGSQ05932 587 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 TMEM62Q0P6H9 643 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 E2F4Q16254 413 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 IER5Q5VY09 327 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 ZNF710Q8N1W2 664 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 SYT2Q8N9I0 419 aaPredicted RBP16■□□□□ 0.15
CSTF3-202ENST00000431742 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms