RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
DDX56-204ENST00000431640 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
DDX56-204ENST00000431640 LSM14BQ9BX40 385 aaKnown RBP14.09□□□□□ -0.15
DDX56-204ENST00000431640 R3HDMLQ9H3Y0 253 aa14.09□□□□□ -0.15
DDX56-204ENST00000431640 ZSWIM4Q9H7M6 989 aa14.09□□□□□ -0.15
DDX56-204ENST00000431640 PLCB1Q9NQ66 1216 aa14.09□□□□□ -0.15
DDX56-204ENST00000431640 JADE2Q9NQC1 790 aa14.09□□□□□ -0.15
DDX56-204ENST00000431640 KCNH7Q9NS40 1196 aa14.09□□□□□ -0.15
DDX56-204ENST00000431640 ZNF214Q9UL59 606 aaPredicted RBP14.09□□□□□ -0.15
DDX56-204ENST00000431640 FRMPD4Q14CM0 1322 aa14.08□□□□□ -0.15
DDX56-204ENST00000431640 CTAGE15A4D2H0 777 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 ARHGEF35A5YM69 484 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 EPHB6O15197 1021 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 NR3C1P04150 777 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 CTAGE8P0CG41 777 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 CYP2C8P10632 490 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 HOXD13P35453 343 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 GTF2A2P52657 109 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 ZNF131P52739 623 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 TMEM132BQ14DG7 1078 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 TEX35Q5T0J7 233 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 CTAGE6Q86UF2 777 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 CTAGE4Q8IX94 777 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 TRIM58Q8NG06 486 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 SYTL5Q8TDW5 730 aaPredicted RBP14.08□□□□□ -0.16
DDX56-204ENST00000431640 SECISBP2LQ93073 1101 aaKnown RBP14.08□□□□□ -0.16
DDX56-204ENST00000431640 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 MKNK1Q9BUB5 465 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 IFIH1Q9BYX4 1025 aaKnown RBP14.08□□□□□ -0.16
DDX56-204ENST00000431640 RAVER2Q9HCJ3 691 aaKnown RBP14.08□□□□□ -0.16
DDX56-204ENST00000431640 TXNRD2Q9NNW7 524 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 BTBD7Q9P203 1132 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 SAR1BQ9Y6B6 198 aa14.08□□□□□ -0.16
DDX56-204ENST00000431640 TESPA1A2RU30 521 aaPredicted RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 GTPBP10A4D1E9 387 aaKnown RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 NFIBO00712 420 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 PJA2O43164 708 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 TACC1O75410 805 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 NOL4O94818 638 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 MAPTP10636 758 aaKnown RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 CETPP11597 493 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 ITGB5P18084 799 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 PSMC2P35998 433 aaKnown RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 MAGEA1P43355 309 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 APLP1P51693 650 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 CLCN6P51797 869 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 AMPD2Q01433 879 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 ALCAMQ13740 583 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 MYBPC2Q14324 1141 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 HS2ST1Q7LGA3 356 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 LXNQ9BS40 222 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 AGO4Q9HCK5 861 aaKnown RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 CREBZFQ9NS37 354 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 AIPL1Q9NZN9 384 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 RIPK3Q9Y572 518 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 BZW2Q9Y6E2 419 aaKnown RBP14.07□□□□□ -0.16
DDX56-204ENST00000431640 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
DDX56-204ENST00000431640 RBAK-RBAKDNI3L0D1 243 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 PDHXO00330 501 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 MAFGO15525 162 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 LYPLA2O95372 231 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 OAZ1P54368 228 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 POLR2FP61218 127 aaKnown RBP14.06□□□□□ -0.16
DDX56-204ENST00000431640 CKAP4Q07065 602 aaKnown RBP14.06□□□□□ -0.16
DDX56-204ENST00000431640 COG2Q14746 738 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 BRD3Q15059 726 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 ASTE1Q2TB18 679 aaPredicted RBP14.06□□□□□ -0.16
DDX56-204ENST00000431640 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
DDX56-204ENST00000431640 TRAPPC11Q7Z392 1133 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 FAM178BQ8IXR5 827 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 RNF10Q8N5U6 811 aaKnown RBP14.06□□□□□ -0.16
DDX56-204ENST00000431640 HHIPL1Q96JK4 782 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 TRERF1Q96PN7 1200 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 TIPINQ9BVW5 301 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 LACRTQ9GZZ8 138 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 COL20A1Q9P218 1284 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 PCNTO95613 3336 aa14.06□□□□□ -0.16
DDX56-204ENST00000431640 SFI1A8K8P3 1242 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 DHX15O43143 795 aaKnown RBP14.05□□□□□ -0.16
DDX56-204ENST00000431640 AOC2O75106 756 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 PRLRP16471 622 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 CYP27A1Q02318 531 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 MTMR1Q13613 665 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 EXOC3L4Q17RC7 722 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 MUM1L1Q5H9M0 696 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 HGSNATQ68CP4 663 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 GBP6Q6ZN66 633 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 RNF207Q6ZRF8 634 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 ALS2CR12Q96Q35 445 aa14.05□□□□□ -0.16
DDX56-204ENST00000431640 PARD6BQ9BYG5 372 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms