RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 USP34Q70CQ2 3546 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
PTCD1-204ENST00000430982 RSPH10B2B2RC85 870 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 RSPH10BP0C881 870 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 MCM7P33993 719 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 HTRA4P83105 476 aaPredicted RBP17.09■□□□□ 0.33
PTCD1-204ENST00000430982 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 CUL4AQ13619 759 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 UGCGQ16739 394 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 MARCH8Q5T0T0 291 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 NCAPH2Q6IBW4 605 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 B3GNT9Q6UX72 402 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
PTCD1-204ENST00000430982 PRKAG3Q9UGI9 489 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 NOL7Q9UMY1 257 aaKnown RBP17.09■□□□□ 0.33
PTCD1-204ENST00000430982 MICAL3Q7RTP6 2002 aa17.09■□□□□ 0.33
PTCD1-204ENST00000430982 EML1O00423 815 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 ZNF862O60290 1169 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 CAND2O75155 1236 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 PRKCEQ02156 737 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 ZNF174Q15697 407 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 TTC38Q5R3I4 469 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 RSPH3Q86UC2 560 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 FBXO22Q8NEZ5 403 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 DNAJB3Q8WWF6 145 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
PTCD1-204ENST00000430982 FAM167AQ96KS9 214 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 INSL6Q9Y581 213 aa17.08■□□□□ 0.32
PTCD1-204ENST00000430982 COL1A2P08123 1366 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
PTCD1-204ENST00000430982 OATP04181 439 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTCD1-204ENST00000430982 KLRC1P26715 233 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 MBTPS1Q14703 1052 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 LARP1BQ659C4 914 aaKnown RBP17.07■□□□□ 0.32
PTCD1-204ENST00000430982 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 BANK1Q8NDB2 785 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 PABPC5Q96DU9 382 aaKnown RBP17.07■□□□□ 0.32
PTCD1-204ENST00000430982 TMEM60Q9H2L4 133 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 NRBP2Q9NSY0 501 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 PCDHA2Q9Y5H9 948 aa17.07■□□□□ 0.32
PTCD1-204ENST00000430982 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 H3BQ06 376 aaPredicted RBP17.06■□□□□ 0.32
PTCD1-204ENST00000430982 RBAK-RBAKDNI3L0D1 243 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 TXKP42681 527 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 TRAPPC10P48553 1259 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 IKBKEQ14164 716 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 TIGD5Q53EQ6 642 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 HFE2Q6ZVN8 426 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 ADHFE1Q8IWW8 467 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
PTCD1-204ENST00000430982 PCDHA12Q9UN75 941 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 C5orf42Q9H799 3197 aa17.06■□□□□ 0.32
PTCD1-204ENST00000430982 ZBTB42B2RXF5 422 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 PSMC5P62195 406 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 NBR1Q14596 966 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 EPHA7Q15375 998 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 PTPROQ16827 1216 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 SAMD11Q96NU1 681 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
PTCD1-204ENST00000430982 CDY2AQ9Y6F7 541 aa17.05■□□□□ 0.32
PTCD1-204ENST00000430982 TECTAO75443 2155 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 RALGAPA2Q2PPJ7 1873 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 NLRC5Q86WI3 1866 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 SMIM35A0A1B0GVV1 85 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 H3BNC9 293 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 M0QZ92 97 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 C22orf31O95567 290 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 CHRNA1P02708 482 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 RPLP2P05387 115 aaKnown RBP17.04■□□□□ 0.32
PTCD1-204ENST00000430982 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 QARSP47897 775 aaKnown RBP17.04■□□□□ 0.32
PTCD1-204ENST00000430982 MRPS6P82932 125 aaKnown RBP17.04■□□□□ 0.32
PTCD1-204ENST00000430982 SPIRE1Q08AE8 756 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
PTCD1-204ENST00000430982 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 XKR3Q5GH77 459 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 FAM26DQ5JW98 314 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTCD1-204ENST00000430982 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 SNX21Q969T3 373 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 FAM50BQ9Y247 325 aa17.04■□□□□ 0.32
PTCD1-204ENST00000430982 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
PTCD1-204ENST00000430982 TMEM150BA6NC51 233 aa17.03■□□□□ 0.32
PTCD1-204ENST00000430982 MAGEB2O15479 319 aa17.03■□□□□ 0.32
PTCD1-204ENST00000430982 DKC1O60832 514 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTCD1-204ENST00000430982 P4HBP07237 508 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms