RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ELP1O95163 1332 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 RRN3P2A6NIE6 340 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 CUTAO60888 179 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 STAM2O75886 525 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 URODP06132 367 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 AKR1A1P14550 325 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 AKR1B1P15121 316 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 INPP5BP32019 993 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 CCDC122Q5T0U0 273 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 SMC5Q8IY18 1101 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 CCDC89Q8N998 374 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 STAMQ92783 540 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 IFT122Q9HBG6 1241 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 UBN1Q9NPG3 1134 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PANK4Q9NVE7 773 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PCDHA6Q9UN73 950 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PCDHA8Q9Y5H6 950 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 GAP43P17677 238 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 PTPRAP18433 802 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 DEKP35659 375 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 CAP2P40123 477 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 MCAMP43121 646 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 BPIFB4P59827 614 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 IRX5P78411 483 aaPredicted RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 DNM1Q05193 864 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 SFSWAPQ12872 951 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 PPP1R7Q15435 360 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 TMEM47Q9BQJ4 181 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 UBE2OQ9C0C9 1292 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 KIAA1683Q9H0B3 1180 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 SLC38A10Q9HBR0 1119 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 SLC9A2Q9UBY0 812 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 RFX7Q2KHR2 1363 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 C17orf102A2RUQ5 167 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 EIF3JO75822 258 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 SLC4A1P02730 911 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 AMHP03971 560 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 PFKMP08237 780 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 SKIP12755 728 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 ARL4DP49703 201 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 KRT83P78385 493 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 PTK2Q05397 1052 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 CKAP4Q07065 602 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 TRMT2AQ8IZ69 625 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 CERS5Q8N5B7 392 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 RASGRP4Q8TDF6 673 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 USP26Q9BXU7 913 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 TMEM206Q9H813 350 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 PTCH2Q9Y6C5 1203 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 IGF2BP3O00425 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 NR3C2P08235 984 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 ALDH1A3P47895 512 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 GSDMDP57764 484 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 ZNF365Q70YC5 407 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 DDX53Q86TM3 631 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 PALM2Q8IXS6 379 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 NT5C1BQ96P26 610 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 COLEC11Q9BWP8 271 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 RNF26Q9BY78 433 aaPredicted RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 IFIH1Q9BYX4 1025 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 METTL14Q9HCE5 456 aaKnown RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 JPH1Q9HDC5 661 aaPredicted RBP7.86□□□□□ -1.15
CNOT4-206ENST00000428680 ANAPC5Q9UJX4 755 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 LOC285556D6RIA3 1793 aa7.86□□□□□ -1.15
CNOT4-206ENST00000428680 A0A1B0GVL5 298 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 MEIS1O00470 390 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 URI1O94763 535 aaPredicted RBP7.85□□□□□ -1.15
CNOT4-206ENST00000428680 GNA14O95837 355 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 F13A1P00488 732 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 BACE1P56817 501 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 CCDC15Q0P6D6 951 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 ZNF667Q5HYK9 610 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 C1orf53Q5VUE5 145 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 CYFIP1Q7L576 1253 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 ZNF512Q96ME7 567 aaPredicted RBP7.85□□□□□ -1.15
CNOT4-206ENST00000428680 HPCAL4Q9UM19 191 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 SHTN1A0MZ66 631 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 STXBP3O00186 592 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 NDUFB10O96000 172 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 LDHAP00338 332 aaKnown RBP7.85□□□□□ -1.15
CNOT4-206ENST00000428680 CALCOCO2Q13137 446 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 ASIC2Q16515 512 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 QRICH1Q2TAL8 776 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 LRRC31Q6UY01 552 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 ZNF467Q7Z7K2 595 aaPredicted RBP7.85□□□□□ -1.15
CNOT4-206ENST00000428680 MAP7D3Q8IWC1 876 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 HAUS1Q96CS2 278 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 PUS7LQ9H0K6 701 aaKnown RBP7.85□□□□□ -1.15
CNOT4-206ENST00000428680 ERAP1Q9NZ08 941 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 PCDHA4Q9UN74 947 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 PCDHB4Q9Y5E5 795 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 PCDHA10Q9Y5I2 948 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 ITGA4P13612 1032 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 PEX3P56589 373 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 AAK1Q2M2I8 961 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 TATDN1Q6P1N9 297 aa7.85□□□□□ -1.15
CNOT4-206ENST00000428680 NOSTRINQ8IVI9 506 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms