RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 CASD1Q96PB1 797 aa11.78□□□□□ -0.52
RDH11-202ENST00000428130 TMEM117Q9H0C3 514 aa11.78□□□□□ -0.52
RDH11-202ENST00000428130 IL25Q9H293 177 aa11.78□□□□□ -0.52
RDH11-202ENST00000428130 RNF19AQ9NV58 838 aa11.78□□□□□ -0.52
RDH11-202ENST00000428130 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
RDH11-202ENST00000428130 ERICH2A1L162 156 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 HIP1O00291 1037 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 GPR182O15218 404 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.53
RDH11-202ENST00000428130 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 KLRC1P26715 233 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 ACTR2P61160 394 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 KRT17Q04695 432 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 TRDNQ13061 729 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.53
RDH11-202ENST00000428130 DSC3Q14574 896 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 RARS2Q5T160 578 aaKnown RBP11.77□□□□□ -0.53
RDH11-202ENST00000428130 LRRC43Q8N309 656 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 C12orf76Q8N812 135 aaPredicted RBP11.77□□□□□ -0.53
RDH11-202ENST00000428130 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.53
RDH11-202ENST00000428130 OSBPL3Q9H4L5 887 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 KCNH7Q9NS40 1196 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 NFASCO94856 1347 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 OTOGLQ3ZCN5 2332 aa11.77□□□□□ -0.53
RDH11-202ENST00000428130 HOXA2O43364 376 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 ATG7O95352 703 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 EOMESO95936 686 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 UBE2SQ16763 222 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 DGLUCYQ7Z3D6 616 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 CATIPQ7Z7H3 387 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 SLC39A11Q8N1S5 342 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 DTWD2Q8NBA8 298 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 OSMRQ99650 979 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 RTP3Q9BQQ7 232 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 PSTPIP2Q9H939 334 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 CYP26B1Q9NR63 512 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 SEC63Q9UGP8 760 aaKnown RBP11.76□□□□□ -0.53
RDH11-202ENST00000428130 DBR1Q9UK59 544 aaKnown RBP11.76□□□□□ -0.53
RDH11-202ENST00000428130 COL1A2P08123 1366 aa11.76□□□□□ -0.53
RDH11-202ENST00000428130 DOCK8Q8NF50 2099 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 IGKV6D-21A0A0A0MT36 114 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 HBP1O60381 514 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 LMNAP02545 664 aaKnown RBP11.75□□□□□ -0.53
RDH11-202ENST00000428130 CYP21A2P08686 494 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 SMARCA1P28370 1054 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 SLC26A2P50443 739 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 CRYBB1P53674 252 aaPredicted RBP11.75□□□□□ -0.53
RDH11-202ENST00000428130 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
RDH11-202ENST00000428130 KIZQ2M2Z5 673 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 ATAT1Q5SQI0 421 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 CYP2W1Q8TAV3 490 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 MXRA8Q9BRK3 442 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 SDF4Q9BRK5 362 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 SEMA4AQ9H3S1 761 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 DZANK1Q9NVP4 752 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 PCDHA6Q9UN73 950 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 DUSP12Q9UNI6 340 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 PCDHA8Q9Y5H6 950 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 MIA3Q5JRA6 1907 aa11.75□□□□□ -0.53
RDH11-202ENST00000428130 ZBTB42B2RXF5 422 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 GPR32O75388 356 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 PLEKHA8P1O95397 391 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 EPCAMP16422 314 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 ANTXR2P58335 489 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 TDGQ13569 410 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 SART3Q15020 963 aaKnown RBP11.74□□□□□ -0.53
RDH11-202ENST00000428130 CLLU1OSQ5K130 101 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 KIAA2013Q8IYS2 634 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 ABI1Q8IZP0 508 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 CTCFLQ8NI51 663 aaPredicted RBP11.74□□□□□ -0.53
RDH11-202ENST00000428130 IGDCC4Q8TDY8 1250 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 MYL10Q9BUA6 226 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 ZBP1Q9H171 429 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 TAF6LQ9Y6J9 622 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
RDH11-202ENST00000428130 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 E7EWF7 191 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 DDAH1O94760 285 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 C22orf31O95567 290 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 CXCL14O95715 111 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 CCNE2O96020 404 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 VTNP04004 478 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 KIF5BP33176 963 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 CA8P35219 290 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 METAP2P50579 478 aaKnown RBP eCLIP11.73□□□□□ -0.53
RDH11-202ENST00000428130 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
RDH11-202ENST00000428130 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 ABHD15Q6UXT9 468 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 RALYLQ86SE5 291 aaKnown RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 ECHDC2Q86YB7 292 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 CCDC60Q8IWA6 550 aaPredicted RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 ZNF654Q8IZM8 581 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms